Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHGC4Q9Y5F7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGC4Q9Y5F7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHGC4Q9Y5F7 EDA-201ENST00000338901 1233 ntBASIC22.3■■□□□ 1.16
PCDHGC4Q9Y5F7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGC4Q9Y5F7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHGC4Q9Y5F7 AL031432.3-201ENST00000607698 485 ntBASIC22.3■■□□□ 1.16
PCDHGC4Q9Y5F7 AC005837.3-201ENST00000612163 286 ntBASIC22.3■■□□□ 1.16
PCDHGC4Q9Y5F7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PCDHGC4Q9Y5F7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHGC4Q9Y5F7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGC4Q9Y5F7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PCDHGC4Q9Y5F7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHGC4Q9Y5F7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGC4Q9Y5F7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGC4Q9Y5F7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
PCDHGC4Q9Y5F7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHGC4Q9Y5F7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHGC4Q9Y5F7 AC010525.1-201ENST00000585559 441 ntBASIC22.29■■□□□ 1.16
PCDHGC4Q9Y5F7 AL355001.2-201ENST00000620617 1191 ntBASIC22.29■■□□□ 1.16
PCDHGC4Q9Y5F7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PCDHGC4Q9Y5F7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHGC4Q9Y5F7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGC4Q9Y5F7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDHGC4Q9Y5F7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
PCDHGC4Q9Y5F7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGC4Q9Y5F7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGC4Q9Y5F7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGC4Q9Y5F7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHGC4Q9Y5F7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGC4Q9Y5F7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PCDHGC4Q9Y5F7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGC4Q9Y5F7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHGC4Q9Y5F7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
PCDHGC4Q9Y5F7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.27■■□□□ 1.16
PCDHGC4Q9Y5F7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGC4Q9Y5F7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PCDHGC4Q9Y5F7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
PCDHGC4Q9Y5F7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGC4Q9Y5F7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.27■■□□□ 1.16
PCDHGC4Q9Y5F7 SLC47A1P1-202ENST00000449666 945 ntBASIC22.27■■□□□ 1.16
PCDHGC4Q9Y5F7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGC4Q9Y5F7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGC4Q9Y5F7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
PCDHGC4Q9Y5F7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.15
PCDHGC4Q9Y5F7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGC4Q9Y5F7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
PCDHGC4Q9Y5F7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGC4Q9Y5F7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHGC4Q9Y5F7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGC4Q9Y5F7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGC4Q9Y5F7 OR2I1P-207ENST00000453522 948 ntBASIC22.26■■□□□ 1.15
PCDHGC4Q9Y5F7 AC008764.7-201ENST00000593779 1081 ntBASIC22.26■■□□□ 1.15
PCDHGC4Q9Y5F7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGC4Q9Y5F7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGC4Q9Y5F7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGC4Q9Y5F7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGC4Q9Y5F7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGC4Q9Y5F7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PCDHGC4Q9Y5F7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGC4Q9Y5F7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGC4Q9Y5F7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGC4Q9Y5F7 SUDS3P1-201ENST00000505831 966 ntBASIC22.25■■□□□ 1.15
PCDHGC4Q9Y5F7 AP001330.3-201ENST00000520123 633 ntBASIC22.25■■□□□ 1.15
PCDHGC4Q9Y5F7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PCDHGC4Q9Y5F7 AF213884.3-201ENST00000563833 479 ntBASIC22.25■■□□□ 1.15
PCDHGC4Q9Y5F7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHGC4Q9Y5F7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHGC4Q9Y5F7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGC4Q9Y5F7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGC4Q9Y5F7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGC4Q9Y5F7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PCDHGC4Q9Y5F7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
PCDHGC4Q9Y5F7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PCDHGC4Q9Y5F7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGC4Q9Y5F7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
PCDHGC4Q9Y5F7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHGC4Q9Y5F7 BX842568.3-201ENST00000418104 571 ntBASIC22.24■■□□□ 1.15
PCDHGC4Q9Y5F7 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.24■■□□□ 1.15
PCDHGC4Q9Y5F7 AL136967.2-201ENST00000623968 743 ntBASIC22.24■■□□□ 1.15
PCDHGC4Q9Y5F7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGC4Q9Y5F7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
PCDHGC4Q9Y5F7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
PCDHGC4Q9Y5F7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGC4Q9Y5F7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDHGC4Q9Y5F7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PCDHGC4Q9Y5F7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGC4Q9Y5F7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGC4Q9Y5F7 AC233992.3-201ENST00000607491 485 ntBASIC22.23■■□□□ 1.15
PCDHGC4Q9Y5F7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGC4Q9Y5F7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHGC4Q9Y5F7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGC4Q9Y5F7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGC4Q9Y5F7 MIR939-201ENST00000401314 82 ntBASIC22.22■■□□□ 1.15
PCDHGC4Q9Y5F7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGC4Q9Y5F7 AC142381.2-201ENST00000566120 298 ntBASIC22.22■■□□□ 1.15
PCDHGC4Q9Y5F7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGC4Q9Y5F7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGC4Q9Y5F7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGC4Q9Y5F7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms