Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LSM5Q9Y4Y9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.15■□□□□ 0.5
LSM5Q9Y4Y9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.14■□□□□ 0.5
LSM5Q9Y4Y9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.14■□□□□ 0.49
LSM5Q9Y4Y9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM5Q9Y4Y9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LSM5Q9Y4Y9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM5Q9Y4Y9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM5Q9Y4Y9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM5Q9Y4Y9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.14■□□□□ 0.49
LSM5Q9Y4Y9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM5Q9Y4Y9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.14■□□□□ 0.49
LSM5Q9Y4Y9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LSM5Q9Y4Y9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM5Q9Y4Y9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
LSM5Q9Y4Y9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM5Q9Y4Y9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LSM5Q9Y4Y9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM5Q9Y4Y9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM5Q9Y4Y9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.13■□□□□ 0.49
LSM5Q9Y4Y9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM5Q9Y4Y9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM5Q9Y4Y9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.13■□□□□ 0.49
LSM5Q9Y4Y9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM5Q9Y4Y9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LSM5Q9Y4Y9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LSM5Q9Y4Y9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM5Q9Y4Y9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM5Q9Y4Y9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM5Q9Y4Y9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM5Q9Y4Y9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM5Q9Y4Y9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 AL592295.1-201ENST00000400984 884 ntBASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.12■□□□□ 0.49
LSM5Q9Y4Y9 FAM99A-202ENST00000538190 1989 ntBASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LSM5Q9Y4Y9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 AC131274.2-201ENST00000580697 1507 ntBASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms