Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SAMD4AQ9UPU9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SAMD4AQ9UPU9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.61■□□□□ 0.89
SAMD4AQ9UPU9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SAMD4AQ9UPU9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SAMD4AQ9UPU9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.6■□□□□ 0.89
SAMD4AQ9UPU9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.6■□□□□ 0.89
SAMD4AQ9UPU9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SAMD4AQ9UPU9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SAMD4AQ9UPU9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SAMD4AQ9UPU9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.6■□□□□ 0.89
SAMD4AQ9UPU9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SAMD4AQ9UPU9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SAMD4AQ9UPU9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SAMD4AQ9UPU9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SAMD4AQ9UPU9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.59■□□□□ 0.89
SAMD4AQ9UPU9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SAMD4AQ9UPU9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.59■□□□□ 0.89
SAMD4AQ9UPU9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SAMD4AQ9UPU9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SAMD4AQ9UPU9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.59■□□□□ 0.89
SAMD4AQ9UPU9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.58■□□□□ 0.89
SAMD4AQ9UPU9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SAMD4AQ9UPU9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SAMD4AQ9UPU9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SAMD4AQ9UPU9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SAMD4AQ9UPU9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.58■□□□□ 0.89
SAMD4AQ9UPU9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.58■□□□□ 0.89
SAMD4AQ9UPU9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SAMD4AQ9UPU9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.58■□□□□ 0.88
SAMD4AQ9UPU9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SAMD4AQ9UPU9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SAMD4AQ9UPU9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SAMD4AQ9UPU9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SAMD4AQ9UPU9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAMD4AQ9UPU9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SAMD4AQ9UPU9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAMD4AQ9UPU9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAMD4AQ9UPU9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAMD4AQ9UPU9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SAMD4AQ9UPU9 HSD17B1P1-201ENST00000590052 955 ntBASIC20.57■□□□□ 0.88
SAMD4AQ9UPU9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SAMD4AQ9UPU9 LINC01529-204ENST00000636474 1715 ntBASIC20.57■□□□□ 0.88
SAMD4AQ9UPU9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAMD4AQ9UPU9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SAMD4AQ9UPU9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAMD4AQ9UPU9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAMD4AQ9UPU9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAMD4AQ9UPU9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SAMD4AQ9UPU9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SAMD4AQ9UPU9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SAMD4AQ9UPU9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SAMD4AQ9UPU9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.56■□□□□ 0.88
SAMD4AQ9UPU9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SAMD4AQ9UPU9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.56■□□□□ 0.88
SAMD4AQ9UPU9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
SAMD4AQ9UPU9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SAMD4AQ9UPU9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SAMD4AQ9UPU9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.56■□□□□ 0.88
SAMD4AQ9UPU9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAMD4AQ9UPU9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SAMD4AQ9UPU9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.55■□□□□ 0.88
SAMD4AQ9UPU9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAMD4AQ9UPU9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAMD4AQ9UPU9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.55■□□□□ 0.88
SAMD4AQ9UPU9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAMD4AQ9UPU9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAMD4AQ9UPU9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAMD4AQ9UPU9 SNX5-217ENST00000606557 1087 ntBASIC20.55■□□□□ 0.88
SAMD4AQ9UPU9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAMD4AQ9UPU9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.55■□□□□ 0.88
SAMD4AQ9UPU9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.54■□□□□ 0.88
SAMD4AQ9UPU9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SAMD4AQ9UPU9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SAMD4AQ9UPU9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SAMD4AQ9UPU9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SAMD4AQ9UPU9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.54■□□□□ 0.88
SAMD4AQ9UPU9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.54■□□□□ 0.88
SAMD4AQ9UPU9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SAMD4AQ9UPU9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.54■□□□□ 0.88
SAMD4AQ9UPU9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SAMD4AQ9UPU9 AL024507.2-201ENST00000606070 2574 ntBASIC20.53■□□□□ 0.88
SAMD4AQ9UPU9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SAMD4AQ9UPU9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms