Protein–RNA interactions for Protein: Q9UKG4

SLC13A4, Solute carrier family 13 member 4, humanhuman

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A4Q9UKG4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC13A4Q9UKG4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC13A4Q9UKG4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC13A4Q9UKG4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC13A4Q9UKG4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC13A4Q9UKG4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC13A4Q9UKG4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC13A4Q9UKG4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC13A4Q9UKG4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC13A4Q9UKG4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC13A4Q9UKG4 EP400NL-214ENST00000641289 2402 ntBASIC20.54■□□□□ 0.88
SLC13A4Q9UKG4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC13A4Q9UKG4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC13A4Q9UKG4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SLC13A4Q9UKG4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC13A4Q9UKG4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC13A4Q9UKG4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC13A4Q9UKG4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC13A4Q9UKG4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC13A4Q9UKG4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC13A4Q9UKG4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SLC13A4Q9UKG4 ECEL1P1-201ENST00000373592 1742 ntBASIC20.53■□□□□ 0.88
SLC13A4Q9UKG4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC13A4Q9UKG4 LINC01529-204ENST00000636474 1715 ntBASIC20.53■□□□□ 0.88
SLC13A4Q9UKG4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC13A4Q9UKG4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC13A4Q9UKG4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SLC13A4Q9UKG4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC13A4Q9UKG4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC13A4Q9UKG4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC13A4Q9UKG4 LINC00526-201ENST00000581067 1875 ntBASIC20.52■□□□□ 0.88
SLC13A4Q9UKG4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC13A4Q9UKG4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC13A4Q9UKG4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC13A4Q9UKG4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC13A4Q9UKG4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC13A4Q9UKG4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC13A4Q9UKG4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC13A4Q9UKG4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC13A4Q9UKG4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC13A4Q9UKG4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC13A4Q9UKG4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
SLC13A4Q9UKG4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 AC242852.2-201ENST00000615738 1807 ntBASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 MTDHP2-201ENST00000601468 714 ntBASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SLC13A4Q9UKG4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SLC13A4Q9UKG4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC13A4Q9UKG4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC13A4Q9UKG4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC13A4Q9UKG4 FP325331.1-202ENST00000623531 1380 ntBASIC20.5■□□□□ 0.87
SLC13A4Q9UKG4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
SLC13A4Q9UKG4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SLC13A4Q9UKG4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC13A4Q9UKG4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC13A4Q9UKG4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC13A4Q9UKG4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC13A4Q9UKG4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC13A4Q9UKG4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SLC13A4Q9UKG4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC13A4Q9UKG4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC13A4Q9UKG4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
SLC13A4Q9UKG4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC13A4Q9UKG4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC13A4Q9UKG4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC13A4Q9UKG4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC13A4Q9UKG4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC13A4Q9UKG4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SLC13A4Q9UKG4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC13A4Q9UKG4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC13A4Q9UKG4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SLC13A4Q9UKG4 Z92544.1-202ENST00000571933 1220 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms