Protein–RNA interactions for Protein: Q9UGI6

KCNN3, Small conductance calcium-activated potassium channel protein 3, humanhuman

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN3Q9UGI6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNN3Q9UGI6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.94■□□□□ 0.78
KCNN3Q9UGI6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.94■□□□□ 0.78
KCNN3Q9UGI6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KCNN3Q9UGI6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KCNN3Q9UGI6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
KCNN3Q9UGI6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KCNN3Q9UGI6 AC099791.1-201ENST00000416440 715 ntBASIC19.93■□□□□ 0.78
KCNN3Q9UGI6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.93■□□□□ 0.78
KCNN3Q9UGI6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
KCNN3Q9UGI6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KCNN3Q9UGI6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.93■□□□□ 0.78
KCNN3Q9UGI6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.93■□□□□ 0.78
KCNN3Q9UGI6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KCNN3Q9UGI6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
KCNN3Q9UGI6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.93■□□□□ 0.78
KCNN3Q9UGI6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KCNN3Q9UGI6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.93■□□□□ 0.78
KCNN3Q9UGI6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 AC241377.3-202ENST00000626088 1088 ntBASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 AC241585.3-202ENST00000628937 1088 ntBASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 AC245100.8-202ENST00000629247 1058 ntBASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.92■□□□□ 0.78
KCNN3Q9UGI6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNN3Q9UGI6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNN3Q9UGI6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNN3Q9UGI6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KCNN3Q9UGI6 AC136469.2-201ENST00000623944 1028 ntBASIC19.91■□□□□ 0.78
KCNN3Q9UGI6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNN3Q9UGI6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
KCNN3Q9UGI6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNN3Q9UGI6 AC004812.2-201ENST00000611079 2094 ntBASIC19.91■□□□□ 0.78
KCNN3Q9UGI6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KCNN3Q9UGI6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KCNN3Q9UGI6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNN3Q9UGI6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
KCNN3Q9UGI6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNN3Q9UGI6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.9■□□□□ 0.78
KCNN3Q9UGI6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
KCNN3Q9UGI6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNN3Q9UGI6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KCNN3Q9UGI6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNN3Q9UGI6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.9■□□□□ 0.78
KCNN3Q9UGI6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.9■□□□□ 0.78
KCNN3Q9UGI6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
KCNN3Q9UGI6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.9■□□□□ 0.78
KCNN3Q9UGI6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
KCNN3Q9UGI6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KCNN3Q9UGI6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
KCNN3Q9UGI6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNN3Q9UGI6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KCNN3Q9UGI6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNN3Q9UGI6 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.89■□□□□ 0.77
KCNN3Q9UGI6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.89■□□□□ 0.77
KCNN3Q9UGI6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KCNN3Q9UGI6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KCNN3Q9UGI6 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.89■□□□□ 0.77
KCNN3Q9UGI6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNN3Q9UGI6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNN3Q9UGI6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNN3Q9UGI6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNN3Q9UGI6 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.88■□□□□ 0.77
KCNN3Q9UGI6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.88■□□□□ 0.77
KCNN3Q9UGI6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.88■□□□□ 0.77
KCNN3Q9UGI6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.88■□□□□ 0.77
KCNN3Q9UGI6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KCNN3Q9UGI6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
KCNN3Q9UGI6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNN3Q9UGI6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.87■□□□□ 0.77
KCNN3Q9UGI6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNN3Q9UGI6 LINC00565-201ENST00000562710 2331 ntBASIC19.87■□□□□ 0.77
KCNN3Q9UGI6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNN3Q9UGI6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCNN3Q9UGI6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
KCNN3Q9UGI6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
KCNN3Q9UGI6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KCNN3Q9UGI6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
KCNN3Q9UGI6 AC233992.3-201ENST00000607491 485 ntBASIC19.87■□□□□ 0.77
KCNN3Q9UGI6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KCNN3Q9UGI6 AC009102.2-201ENST00000606772 1639 ntBASIC19.87■□□□□ 0.77
KCNN3Q9UGI6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
KCNN3Q9UGI6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNN3Q9UGI6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNN3Q9UGI6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNN3Q9UGI6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms