Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.02■□□□□ 0.96
NIPSNAP3AQ9UFN0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NIPSNAP3AQ9UFN0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NIPSNAP3AQ9UFN0 AC007375.3-201ENST00000600936 2314 ntBASIC21.02■□□□□ 0.96
NIPSNAP3AQ9UFN0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NIPSNAP3AQ9UFN0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NIPSNAP3AQ9UFN0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NIPSNAP3AQ9UFN0 C11orf96-202ENST00000528572 1834 ntBASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 AC144652.1-201ENST00000609974 1624 ntBASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 AC080038.3-201ENST00000623346 1952 ntBASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NIPSNAP3AQ9UFN0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NIPSNAP3AQ9UFN0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21■□□□□ 0.95
NIPSNAP3AQ9UFN0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21■□□□□ 0.95
NIPSNAP3AQ9UFN0 TSPY13P-201ENST00000338964 914 ntBASIC21■□□□□ 0.95
NIPSNAP3AQ9UFN0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21■□□□□ 0.95
NIPSNAP3AQ9UFN0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NIPSNAP3AQ9UFN0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21■□□□□ 0.95
NIPSNAP3AQ9UFN0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NIPSNAP3AQ9UFN0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
NIPSNAP3AQ9UFN0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NIPSNAP3AQ9UFN0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NIPSNAP3AQ9UFN0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NIPSNAP3AQ9UFN0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NIPSNAP3AQ9UFN0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.99■□□□□ 0.95
NIPSNAP3AQ9UFN0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.99■□□□□ 0.95
NIPSNAP3AQ9UFN0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
NIPSNAP3AQ9UFN0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NIPSNAP3AQ9UFN0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NIPSNAP3AQ9UFN0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NIPSNAP3AQ9UFN0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.99■□□□□ 0.95
NIPSNAP3AQ9UFN0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NIPSNAP3AQ9UFN0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NIPSNAP3AQ9UFN0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.99■□□□□ 0.95
NIPSNAP3AQ9UFN0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NIPSNAP3AQ9UFN0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NIPSNAP3AQ9UFN0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NIPSNAP3AQ9UFN0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.98■□□□□ 0.95
NIPSNAP3AQ9UFN0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.98■□□□□ 0.95
NIPSNAP3AQ9UFN0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
NIPSNAP3AQ9UFN0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.98■□□□□ 0.95
NIPSNAP3AQ9UFN0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.98■□□□□ 0.95
NIPSNAP3AQ9UFN0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NIPSNAP3AQ9UFN0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NIPSNAP3AQ9UFN0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NIPSNAP3AQ9UFN0 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.97■□□□□ 0.95
NIPSNAP3AQ9UFN0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.97■□□□□ 0.95
NIPSNAP3AQ9UFN0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NIPSNAP3AQ9UFN0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NIPSNAP3AQ9UFN0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NIPSNAP3AQ9UFN0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
NIPSNAP3AQ9UFN0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
NIPSNAP3AQ9UFN0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NIPSNAP3AQ9UFN0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NIPSNAP3AQ9UFN0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NIPSNAP3AQ9UFN0 SNX5-217ENST00000606557 1087 ntBASIC20.97■□□□□ 0.95
NIPSNAP3AQ9UFN0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.97■□□□□ 0.95
NIPSNAP3AQ9UFN0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.97■□□□□ 0.95
NIPSNAP3AQ9UFN0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NIPSNAP3AQ9UFN0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NIPSNAP3AQ9UFN0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NIPSNAP3AQ9UFN0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NIPSNAP3AQ9UFN0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NIPSNAP3AQ9UFN0 AC087742.1-201ENST00000575880 1738 ntBASIC20.96■□□□□ 0.95
NIPSNAP3AQ9UFN0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NIPSNAP3AQ9UFN0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NIPSNAP3AQ9UFN0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.96■□□□□ 0.95
NIPSNAP3AQ9UFN0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
NIPSNAP3AQ9UFN0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NIPSNAP3AQ9UFN0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NIPSNAP3AQ9UFN0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NIPSNAP3AQ9UFN0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
NIPSNAP3AQ9UFN0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NIPSNAP3AQ9UFN0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NIPSNAP3AQ9UFN0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.95■□□□□ 0.94
NIPSNAP3AQ9UFN0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.95■□□□□ 0.94
NIPSNAP3AQ9UFN0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
NIPSNAP3AQ9UFN0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.95■□□□□ 0.94
NIPSNAP3AQ9UFN0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.95■□□□□ 0.94
NIPSNAP3AQ9UFN0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NIPSNAP3AQ9UFN0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NIPSNAP3AQ9UFN0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NIPSNAP3AQ9UFN0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NIPSNAP3AQ9UFN0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NIPSNAP3AQ9UFN0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NIPSNAP3AQ9UFN0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NIPSNAP3AQ9UFN0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms