Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.72■■□□□ 1.39
NXF1Q9UBU9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
NXF1Q9UBU9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NXF1Q9UBU9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NXF1Q9UBU9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.71■■□□□ 1.39
NXF1Q9UBU9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.71■■□□□ 1.39
NXF1Q9UBU9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
NXF1Q9UBU9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.71■■□□□ 1.39
NXF1Q9UBU9 AC133561.4-201ENST00000566112 224 ntBASIC23.71■■□□□ 1.39
NXF1Q9UBU9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.39
NXF1Q9UBU9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.7■■□□□ 1.38
NXF1Q9UBU9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NXF1Q9UBU9 EDA-201ENST00000338901 1233 ntBASIC23.7■■□□□ 1.38
NXF1Q9UBU9 AC005837.3-201ENST00000612163 286 ntBASIC23.7■■□□□ 1.38
NXF1Q9UBU9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.38
NXF1Q9UBU9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NXF1Q9UBU9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.7■■□□□ 1.38
NXF1Q9UBU9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
NXF1Q9UBU9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
NXF1Q9UBU9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
NXF1Q9UBU9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NXF1Q9UBU9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
NXF1Q9UBU9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NXF1Q9UBU9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NXF1Q9UBU9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.69■■□□□ 1.38
NXF1Q9UBU9 AC010525.1-201ENST00000585559 441 ntBASIC23.69■■□□□ 1.38
NXF1Q9UBU9 AL355001.2-201ENST00000620617 1191 ntBASIC23.69■■□□□ 1.38
NXF1Q9UBU9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
NXF1Q9UBU9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
NXF1Q9UBU9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
NXF1Q9UBU9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.69■■□□□ 1.38
NXF1Q9UBU9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.69■■□□□ 1.38
NXF1Q9UBU9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.68■■□□□ 1.38
NXF1Q9UBU9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
NXF1Q9UBU9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.68■■□□□ 1.38
NXF1Q9UBU9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NXF1Q9UBU9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.68■■□□□ 1.38
NXF1Q9UBU9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.68■■□□□ 1.38
NXF1Q9UBU9 SLC47A1P1-202ENST00000449666 945 ntBASIC23.68■■□□□ 1.38
NXF1Q9UBU9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
NXF1Q9UBU9 AC008764.7-201ENST00000593779 1081 ntBASIC23.68■■□□□ 1.38
NXF1Q9UBU9 AL031432.3-201ENST00000607698 485 ntBASIC23.68■■□□□ 1.38
NXF1Q9UBU9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NXF1Q9UBU9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
NXF1Q9UBU9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
NXF1Q9UBU9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.68■■□□□ 1.38
NXF1Q9UBU9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
NXF1Q9UBU9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.68■■□□□ 1.38
NXF1Q9UBU9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.68■■□□□ 1.38
NXF1Q9UBU9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NXF1Q9UBU9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.67■■□□□ 1.38
NXF1Q9UBU9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
NXF1Q9UBU9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.67■■□□□ 1.38
NXF1Q9UBU9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.67■■□□□ 1.38
NXF1Q9UBU9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NXF1Q9UBU9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
NXF1Q9UBU9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
NXF1Q9UBU9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NXF1Q9UBU9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NXF1Q9UBU9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NXF1Q9UBU9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
NXF1Q9UBU9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NXF1Q9UBU9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
NXF1Q9UBU9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.66■■□□□ 1.38
NXF1Q9UBU9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NXF1Q9UBU9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.66■■□□□ 1.38
NXF1Q9UBU9 AP001330.3-201ENST00000520123 633 ntBASIC23.66■■□□□ 1.38
NXF1Q9UBU9 AF213884.3-201ENST00000563833 479 ntBASIC23.66■■□□□ 1.38
NXF1Q9UBU9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.66■■□□□ 1.38
NXF1Q9UBU9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
NXF1Q9UBU9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NXF1Q9UBU9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
NXF1Q9UBU9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
NXF1Q9UBU9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.65■■□□□ 1.38
NXF1Q9UBU9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NXF1Q9UBU9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NXF1Q9UBU9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.65■■□□□ 1.38
NXF1Q9UBU9 OR2I1P-207ENST00000453522 948 ntBASIC23.65■■□□□ 1.38
NXF1Q9UBU9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
NXF1Q9UBU9 AC142381.2-201ENST00000566120 298 ntBASIC23.65■■□□□ 1.38
NXF1Q9UBU9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.65■■□□□ 1.38
NXF1Q9UBU9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NXF1Q9UBU9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
NXF1Q9UBU9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
NXF1Q9UBU9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.64■■□□□ 1.38
NXF1Q9UBU9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.64■■□□□ 1.38
NXF1Q9UBU9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.38
NXF1Q9UBU9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
NXF1Q9UBU9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.64■■□□□ 1.37
NXF1Q9UBU9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.64■■□□□ 1.37
NXF1Q9UBU9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NXF1Q9UBU9 SUDS3P1-201ENST00000505831 966 ntBASIC23.64■■□□□ 1.37
NXF1Q9UBU9 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.64■■□□□ 1.37
NXF1Q9UBU9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NXF1Q9UBU9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.64■■□□□ 1.37
NXF1Q9UBU9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
NXF1Q9UBU9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NXF1Q9UBU9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.64■■□□□ 1.37
NXF1Q9UBU9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
NXF1Q9UBU9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms