Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 AC087623.3-201ENST00000607047 1098 ntBASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 AL358852.1-201ENST00000623174 1268 ntBASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 AC012414.1-201ENST00000556676 535 ntBASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCF1Q9UBD9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCF1Q9UBD9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.64■□□□□ 0.73
CLCF1Q9UBD9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CLCF1Q9UBD9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.64■□□□□ 0.73
CLCF1Q9UBD9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
CLCF1Q9UBD9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCF1Q9UBD9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCF1Q9UBD9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CLCF1Q9UBD9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.73
CLCF1Q9UBD9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCF1Q9UBD9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCF1Q9UBD9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.63■□□□□ 0.73
CLCF1Q9UBD9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCF1Q9UBD9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCF1Q9UBD9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCF1Q9UBD9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCF1Q9UBD9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCF1Q9UBD9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.63■□□□□ 0.73
CLCF1Q9UBD9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCF1Q9UBD9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCF1Q9UBD9 AL354811.1-201ENST00000610286 706 ntBASIC19.63■□□□□ 0.73
CLCF1Q9UBD9 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.63■□□□□ 0.73
CLCF1Q9UBD9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CLCF1Q9UBD9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
CLCF1Q9UBD9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCF1Q9UBD9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCF1Q9UBD9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCF1Q9UBD9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCF1Q9UBD9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCF1Q9UBD9 AC027612.3-201ENST00000413684 1047 ntBASIC19.62■□□□□ 0.73
CLCF1Q9UBD9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.62■□□□□ 0.73
CLCF1Q9UBD9 YBX1P1-201ENST00000445822 960 ntBASIC19.62■□□□□ 0.73
CLCF1Q9UBD9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.62■□□□□ 0.73
CLCF1Q9UBD9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCF1Q9UBD9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.62■□□□□ 0.73
CLCF1Q9UBD9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCF1Q9UBD9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCF1Q9UBD9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCF1Q9UBD9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCF1Q9UBD9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCF1Q9UBD9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCF1Q9UBD9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCF1Q9UBD9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCF1Q9UBD9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCF1Q9UBD9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCF1Q9UBD9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCF1Q9UBD9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCF1Q9UBD9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCF1Q9UBD9 AC068587.7-201ENST00000641602 218 ntBASIC19.61■□□□□ 0.73
CLCF1Q9UBD9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.61■□□□□ 0.73
CLCF1Q9UBD9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.61■□□□□ 0.73
CLCF1Q9UBD9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 MIR6084-201ENST00000622012 110 ntBASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 AL031602.1-201ENST00000633169 911 ntBASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
CLCF1Q9UBD9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCF1Q9UBD9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCF1Q9UBD9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.59■□□□□ 0.73
CLCF1Q9UBD9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.59■□□□□ 0.73
CLCF1Q9UBD9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.59■□□□□ 0.73
CLCF1Q9UBD9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.59■□□□□ 0.73
CLCF1Q9UBD9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.59■□□□□ 0.73
CLCF1Q9UBD9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCF1Q9UBD9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCF1Q9UBD9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms