Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ABHD17AP5-201ENST00000580133 923 ntBASIC21.85■■□□□ 1.09
MKS1Q9NXB0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.85■■□□□ 1.09
MKS1Q9NXB0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MKS1Q9NXB0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MKS1Q9NXB0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MKS1Q9NXB0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MKS1Q9NXB0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MKS1Q9NXB0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
MKS1Q9NXB0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.84■■□□□ 1.09
MKS1Q9NXB0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MKS1Q9NXB0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
MKS1Q9NXB0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.84■■□□□ 1.09
MKS1Q9NXB0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.83■■□□□ 1.09
MKS1Q9NXB0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.83■■□□□ 1.09
MKS1Q9NXB0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.83■■□□□ 1.09
MKS1Q9NXB0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.83■■□□□ 1.09
MKS1Q9NXB0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
MKS1Q9NXB0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.83■■□□□ 1.09
MKS1Q9NXB0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.83■■□□□ 1.09
MKS1Q9NXB0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
MKS1Q9NXB0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MKS1Q9NXB0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.83■■□□□ 1.09
MKS1Q9NXB0 MIR4508-201ENST00000584178 70 ntBASIC21.83■■□□□ 1.09
MKS1Q9NXB0 AC009086.3-201ENST00000623486 1008 ntBASIC21.83■■□□□ 1.09
MKS1Q9NXB0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.83■■□□□ 1.09
MKS1Q9NXB0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
MKS1Q9NXB0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
MKS1Q9NXB0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MKS1Q9NXB0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MKS1Q9NXB0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MKS1Q9NXB0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.82■■□□□ 1.08
MKS1Q9NXB0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
MKS1Q9NXB0 ATP5G2P3-201ENST00000429083 425 ntBASIC21.82■■□□□ 1.08
MKS1Q9NXB0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MKS1Q9NXB0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MKS1Q9NXB0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
MKS1Q9NXB0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
MKS1Q9NXB0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
MKS1Q9NXB0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
MKS1Q9NXB0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MKS1Q9NXB0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MKS1Q9NXB0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
MKS1Q9NXB0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
MKS1Q9NXB0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.81■■□□□ 1.08
MKS1Q9NXB0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.81■■□□□ 1.08
MKS1Q9NXB0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MKS1Q9NXB0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MKS1Q9NXB0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.81■■□□□ 1.08
MKS1Q9NXB0 AC004987.1-201ENST00000428627 508 ntBASIC21.81■■□□□ 1.08
MKS1Q9NXB0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
MKS1Q9NXB0 DUX4L4-201ENST00000566884 1269 ntBASIC21.81■■□□□ 1.08
MKS1Q9NXB0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
MKS1Q9NXB0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.81■■□□□ 1.08
MKS1Q9NXB0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
MKS1Q9NXB0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
MKS1Q9NXB0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.81■■□□□ 1.08
MKS1Q9NXB0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MKS1Q9NXB0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MKS1Q9NXB0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MKS1Q9NXB0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.8■■□□□ 1.08
MKS1Q9NXB0 AC010980.1-201ENST00000587192 1142 ntBASIC21.8■■□□□ 1.08
MKS1Q9NXB0 CA15P2-201ENST00000611168 834 ntBASIC21.8■■□□□ 1.08
MKS1Q9NXB0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MKS1Q9NXB0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MKS1Q9NXB0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.8■■□□□ 1.08
MKS1Q9NXB0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.8■■□□□ 1.08
MKS1Q9NXB0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MKS1Q9NXB0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MKS1Q9NXB0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MKS1Q9NXB0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MKS1Q9NXB0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.79■■□□□ 1.08
MKS1Q9NXB0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.79■■□□□ 1.08
MKS1Q9NXB0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.79■■□□□ 1.08
MKS1Q9NXB0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.79■■□□□ 1.08
MKS1Q9NXB0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.79■■□□□ 1.08
MKS1Q9NXB0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MKS1Q9NXB0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MKS1Q9NXB0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MKS1Q9NXB0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MKS1Q9NXB0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.78■■□□□ 1.08
MKS1Q9NXB0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MKS1Q9NXB0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.78■■□□□ 1.08
MKS1Q9NXB0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MKS1Q9NXB0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.78■■□□□ 1.08
MKS1Q9NXB0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MKS1Q9NXB0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MKS1Q9NXB0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.78■■□□□ 1.08
MKS1Q9NXB0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MKS1Q9NXB0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
MKS1Q9NXB0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.77■■□□□ 1.08
MKS1Q9NXB0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.77■■□□□ 1.08
MKS1Q9NXB0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
MKS1Q9NXB0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MKS1Q9NXB0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.77■■□□□ 1.08
MKS1Q9NXB0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MKS1Q9NXB0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.77■■□□□ 1.08
MKS1Q9NXB0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
MKS1Q9NXB0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MKS1Q9NXB0 AC005703.6-201ENST00000623265 1329 ntBASIC21.77■■□□□ 1.07
MKS1Q9NXB0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms