Protein–RNA interactions for Protein: Q9NVH0

EXD2, Exonuclease 3'-5' domain-containing protein 2, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD2Q9NVH0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
EXD2Q9NVH0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
EXD2Q9NVH0 AC137767.1-201ENST00000602918 1920 ntBASIC20.84■□□□□ 0.93
EXD2Q9NVH0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EXD2Q9NVH0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
EXD2Q9NVH0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EXD2Q9NVH0 AC239859.2-201ENST00000444165 318 ntBASIC20.84■□□□□ 0.93
EXD2Q9NVH0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.84■□□□□ 0.93
EXD2Q9NVH0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EXD2Q9NVH0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EXD2Q9NVH0 AC127496.7-201ENST00000625110 1798 ntBASIC20.84■□□□□ 0.93
EXD2Q9NVH0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.84■□□□□ 0.93
EXD2Q9NVH0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EXD2Q9NVH0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EXD2Q9NVH0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.83■□□□□ 0.93
EXD2Q9NVH0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
EXD2Q9NVH0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EXD2Q9NVH0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.83■□□□□ 0.93
EXD2Q9NVH0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.83■□□□□ 0.93
EXD2Q9NVH0 AC009299.2-201ENST00000482477 511 ntBASIC20.83■□□□□ 0.93
EXD2Q9NVH0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
EXD2Q9NVH0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EXD2Q9NVH0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
EXD2Q9NVH0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
EXD2Q9NVH0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
EXD2Q9NVH0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.83■□□□□ 0.92
EXD2Q9NVH0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
EXD2Q9NVH0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
EXD2Q9NVH0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 AC144652.1-201ENST00000609974 1624 ntBASIC20.82■□□□□ 0.92
EXD2Q9NVH0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 AL353803.4-201ENST00000565882 1934 ntBASIC20.82■□□□□ 0.92
EXD2Q9NVH0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
EXD2Q9NVH0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.81■□□□□ 0.92
EXD2Q9NVH0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
EXD2Q9NVH0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.81■□□□□ 0.92
EXD2Q9NVH0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
EXD2Q9NVH0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.81■□□□□ 0.92
EXD2Q9NVH0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXD2Q9NVH0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXD2Q9NVH0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
EXD2Q9NVH0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
EXD2Q9NVH0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
EXD2Q9NVH0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.81■□□□□ 0.92
EXD2Q9NVH0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.81■□□□□ 0.92
EXD2Q9NVH0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXD2Q9NVH0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
EXD2Q9NVH0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXD2Q9NVH0 AL451085.2-201ENST00000605085 799 ntBASIC20.8■□□□□ 0.92
EXD2Q9NVH0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXD2Q9NVH0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
EXD2Q9NVH0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
EXD2Q9NVH0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXD2Q9NVH0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.79■□□□□ 0.92
EXD2Q9NVH0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXD2Q9NVH0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.79■□□□□ 0.92
EXD2Q9NVH0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXD2Q9NVH0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXD2Q9NVH0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EXD2Q9NVH0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.79■□□□□ 0.92
EXD2Q9NVH0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EXD2Q9NVH0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EXD2Q9NVH0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
EXD2Q9NVH0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
EXD2Q9NVH0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
EXD2Q9NVH0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXD2Q9NVH0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXD2Q9NVH0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.78■□□□□ 0.92
EXD2Q9NVH0 AC010997.5-201ENST00000609182 354 ntBASIC20.78■□□□□ 0.92
EXD2Q9NVH0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.78■□□□□ 0.92
EXD2Q9NVH0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXD2Q9NVH0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
EXD2Q9NVH0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.78■□□□□ 0.92
EXD2Q9NVH0 ESRRAP2-201ENST00000418437 1549 ntBASIC20.78■□□□□ 0.92
EXD2Q9NVH0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXD2Q9NVH0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
EXD2Q9NVH0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXD2Q9NVH0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
EXD2Q9NVH0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.77■□□□□ 0.92
EXD2Q9NVH0 TSPY9P-201ENST00000440215 945 ntBASIC20.77■□□□□ 0.92
EXD2Q9NVH0 TSPY11P-201ENST00000442607 1045 ntBASIC20.77■□□□□ 0.92
EXD2Q9NVH0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EXD2Q9NVH0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
EXD2Q9NVH0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.77■□□□□ 0.92
EXD2Q9NVH0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
EXD2Q9NVH0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms