Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.92■□□□□ 0.78
HINT3Q9NQE9 SNX5-217ENST00000606557 1087 ntBASIC19.92■□□□□ 0.78
HINT3Q9NQE9 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.92■□□□□ 0.78
HINT3Q9NQE9 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.92■□□□□ 0.78
HINT3Q9NQE9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HINT3Q9NQE9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HINT3Q9NQE9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.92■□□□□ 0.78
HINT3Q9NQE9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HINT3Q9NQE9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.92■□□□□ 0.78
HINT3Q9NQE9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HINT3Q9NQE9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HINT3Q9NQE9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HINT3Q9NQE9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HINT3Q9NQE9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HINT3Q9NQE9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HINT3Q9NQE9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.91■□□□□ 0.78
HINT3Q9NQE9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.91■□□□□ 0.78
HINT3Q9NQE9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.91■□□□□ 0.78
HINT3Q9NQE9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HINT3Q9NQE9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.91■□□□□ 0.78
HINT3Q9NQE9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
HINT3Q9NQE9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HINT3Q9NQE9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.91■□□□□ 0.78
HINT3Q9NQE9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HINT3Q9NQE9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.9■□□□□ 0.78
HINT3Q9NQE9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HINT3Q9NQE9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HINT3Q9NQE9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.9■□□□□ 0.78
HINT3Q9NQE9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HINT3Q9NQE9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.9■□□□□ 0.78
HINT3Q9NQE9 MIR4787-201ENST00000607364 84 ntBASIC19.9■□□□□ 0.78
HINT3Q9NQE9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HINT3Q9NQE9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HINT3Q9NQE9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HINT3Q9NQE9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HINT3Q9NQE9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HINT3Q9NQE9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HINT3Q9NQE9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HINT3Q9NQE9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HINT3Q9NQE9 GUSBP5-201ENST00000418136 578 ntBASIC19.89■□□□□ 0.77
HINT3Q9NQE9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.89■□□□□ 0.77
HINT3Q9NQE9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HINT3Q9NQE9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HINT3Q9NQE9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
HINT3Q9NQE9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.89■□□□□ 0.77
HINT3Q9NQE9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HINT3Q9NQE9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HINT3Q9NQE9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.88■□□□□ 0.77
HINT3Q9NQE9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HINT3Q9NQE9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HINT3Q9NQE9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.88■□□□□ 0.77
HINT3Q9NQE9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
HINT3Q9NQE9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HINT3Q9NQE9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HINT3Q9NQE9 AC021242.3-201ENST00000607598 1377 ntBASIC19.88■□□□□ 0.77
HINT3Q9NQE9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HINT3Q9NQE9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HINT3Q9NQE9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HINT3Q9NQE9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.88■□□□□ 0.77
HINT3Q9NQE9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HINT3Q9NQE9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HINT3Q9NQE9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HINT3Q9NQE9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HINT3Q9NQE9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HINT3Q9NQE9 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.87■□□□□ 0.77
HINT3Q9NQE9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HINT3Q9NQE9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
HINT3Q9NQE9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.87■□□□□ 0.77
HINT3Q9NQE9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HINT3Q9NQE9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HINT3Q9NQE9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HINT3Q9NQE9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HINT3Q9NQE9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HINT3Q9NQE9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HINT3Q9NQE9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HINT3Q9NQE9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HINT3Q9NQE9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.86■□□□□ 0.77
HINT3Q9NQE9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.86■□□□□ 0.77
HINT3Q9NQE9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HINT3Q9NQE9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HINT3Q9NQE9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HINT3Q9NQE9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HINT3Q9NQE9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HINT3Q9NQE9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.85■□□□□ 0.77
HINT3Q9NQE9 AL137060.1-201ENST00000618151 2648 ntBASIC19.85■□□□□ 0.77
HINT3Q9NQE9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HINT3Q9NQE9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HINT3Q9NQE9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HINT3Q9NQE9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.85■□□□□ 0.77
HINT3Q9NQE9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HINT3Q9NQE9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HINT3Q9NQE9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HINT3Q9NQE9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HINT3Q9NQE9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HINT3Q9NQE9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HINT3Q9NQE9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HINT3Q9NQE9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.84■□□□□ 0.77
HINT3Q9NQE9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.84■□□□□ 0.77
HINT3Q9NQE9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HINT3Q9NQE9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms