Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MRM3Q9HC36 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
MRM3Q9HC36 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
MRM3Q9HC36 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MRM3Q9HC36 AC139530.1-201ENST00000575312 1977 ntBASIC22.12■■□□□ 1.13
MRM3Q9HC36 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.12■■□□□ 1.13
MRM3Q9HC36 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MRM3Q9HC36 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MRM3Q9HC36 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MRM3Q9HC36 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.11■■□□□ 1.13
MRM3Q9HC36 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.11■■□□□ 1.13
MRM3Q9HC36 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.11■■□□□ 1.13
MRM3Q9HC36 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MRM3Q9HC36 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MRM3Q9HC36 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MRM3Q9HC36 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
MRM3Q9HC36 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MRM3Q9HC36 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MRM3Q9HC36 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.1■■□□□ 1.13
MRM3Q9HC36 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MRM3Q9HC36 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MRM3Q9HC36 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
MRM3Q9HC36 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.1■■□□□ 1.13
MRM3Q9HC36 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.1■■□□□ 1.13
MRM3Q9HC36 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MRM3Q9HC36 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
MRM3Q9HC36 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MRM3Q9HC36 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
MRM3Q9HC36 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
MRM3Q9HC36 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MRM3Q9HC36 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MRM3Q9HC36 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
MRM3Q9HC36 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MRM3Q9HC36 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.09■■□□□ 1.13
MRM3Q9HC36 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.09■■□□□ 1.13
MRM3Q9HC36 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.09■■□□□ 1.13
MRM3Q9HC36 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.09■■□□□ 1.13
MRM3Q9HC36 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.09■■□□□ 1.13
MRM3Q9HC36 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
MRM3Q9HC36 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
MRM3Q9HC36 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MRM3Q9HC36 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
MRM3Q9HC36 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.08■■□□□ 1.13
MRM3Q9HC36 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
MRM3Q9HC36 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.13
MRM3Q9HC36 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
MRM3Q9HC36 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
MRM3Q9HC36 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
MRM3Q9HC36 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
MRM3Q9HC36 AC080038.3-201ENST00000623346 1952 ntBASIC22.08■■□□□ 1.12
MRM3Q9HC36 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.08■■□□□ 1.12
MRM3Q9HC36 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
MRM3Q9HC36 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
MRM3Q9HC36 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
MRM3Q9HC36 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.07■■□□□ 1.12
MRM3Q9HC36 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.07■■□□□ 1.12
MRM3Q9HC36 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
MRM3Q9HC36 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MRM3Q9HC36 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.07■■□□□ 1.12
MRM3Q9HC36 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MRM3Q9HC36 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
MRM3Q9HC36 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
MRM3Q9HC36 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MRM3Q9HC36 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.07■■□□□ 1.12
MRM3Q9HC36 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
MRM3Q9HC36 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.07■■□□□ 1.12
MRM3Q9HC36 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.07■■□□□ 1.12
MRM3Q9HC36 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MRM3Q9HC36 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
MRM3Q9HC36 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
MRM3Q9HC36 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.06■■□□□ 1.12
MRM3Q9HC36 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.06■■□□□ 1.12
MRM3Q9HC36 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.06■■□□□ 1.12
MRM3Q9HC36 CA15P2-201ENST00000611168 834 ntBASIC22.06■■□□□ 1.12
MRM3Q9HC36 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.06■■□□□ 1.12
MRM3Q9HC36 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
MRM3Q9HC36 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
MRM3Q9HC36 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
MRM3Q9HC36 AC092053.2-201ENST00000640557 1818 ntBASIC22.06■■□□□ 1.12
MRM3Q9HC36 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.06■■□□□ 1.12
MRM3Q9HC36 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.05■■□□□ 1.12
MRM3Q9HC36 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.05■■□□□ 1.12
MRM3Q9HC36 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MRM3Q9HC36 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
MRM3Q9HC36 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.05■■□□□ 1.12
MRM3Q9HC36 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
MRM3Q9HC36 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
MRM3Q9HC36 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.05■■□□□ 1.12
MRM3Q9HC36 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MRM3Q9HC36 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.05■■□□□ 1.12
MRM3Q9HC36 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MRM3Q9HC36 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.05■■□□□ 1.12
MRM3Q9HC36 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.05■■□□□ 1.12
MRM3Q9HC36 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.05■■□□□ 1.12
MRM3Q9HC36 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.05■■□□□ 1.12
MRM3Q9HC36 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MRM3Q9HC36 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.05■■□□□ 1.12
MRM3Q9HC36 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MRM3Q9HC36 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MRM3Q9HC36 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms