Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC004687.1-201ENST00000579003 1625 ntBASIC21.12■□□□□ 0.97
BRF2Q9HAW0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BRF2Q9HAW0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
BRF2Q9HAW0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.12■□□□□ 0.97
BRF2Q9HAW0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.12■□□□□ 0.97
BRF2Q9HAW0 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.12■□□□□ 0.97
BRF2Q9HAW0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.12■□□□□ 0.97
BRF2Q9HAW0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BRF2Q9HAW0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BRF2Q9HAW0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BRF2Q9HAW0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BRF2Q9HAW0 LINC01960-201ENST00000563759 1884 ntBASIC21.11■□□□□ 0.97
BRF2Q9HAW0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BRF2Q9HAW0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BRF2Q9HAW0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BRF2Q9HAW0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
BRF2Q9HAW0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
BRF2Q9HAW0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BRF2Q9HAW0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRF2Q9HAW0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRF2Q9HAW0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRF2Q9HAW0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRF2Q9HAW0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRF2Q9HAW0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRF2Q9HAW0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRF2Q9HAW0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
BRF2Q9HAW0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRF2Q9HAW0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
BRF2Q9HAW0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRF2Q9HAW0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BRF2Q9HAW0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BRF2Q9HAW0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.1■□□□□ 0.97
BRF2Q9HAW0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.1■□□□□ 0.97
BRF2Q9HAW0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
BRF2Q9HAW0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
BRF2Q9HAW0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BRF2Q9HAW0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.09■□□□□ 0.97
BRF2Q9HAW0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BRF2Q9HAW0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BRF2Q9HAW0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
BRF2Q9HAW0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BRF2Q9HAW0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
BRF2Q9HAW0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BRF2Q9HAW0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BRF2Q9HAW0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BRF2Q9HAW0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BRF2Q9HAW0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.09■□□□□ 0.97
BRF2Q9HAW0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
BRF2Q9HAW0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
BRF2Q9HAW0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
BRF2Q9HAW0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.08■□□□□ 0.97
BRF2Q9HAW0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BRF2Q9HAW0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
BRF2Q9HAW0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
BRF2Q9HAW0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
BRF2Q9HAW0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.08■□□□□ 0.96
BRF2Q9HAW0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
BRF2Q9HAW0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
BRF2Q9HAW0 AC139530.1-201ENST00000575312 1977 ntBASIC21.07■□□□□ 0.96
BRF2Q9HAW0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRF2Q9HAW0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
BRF2Q9HAW0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
BRF2Q9HAW0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.07■□□□□ 0.96
BRF2Q9HAW0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.07■□□□□ 0.96
BRF2Q9HAW0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.07■□□□□ 0.96
BRF2Q9HAW0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.07■□□□□ 0.96
BRF2Q9HAW0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.07■□□□□ 0.96
BRF2Q9HAW0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.07■□□□□ 0.96
BRF2Q9HAW0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.07■□□□□ 0.96
BRF2Q9HAW0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRF2Q9HAW0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRF2Q9HAW0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRF2Q9HAW0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BRF2Q9HAW0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
BRF2Q9HAW0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRF2Q9HAW0 AC080038.3-201ENST00000623346 1952 ntBASIC21.05■□□□□ 0.96
BRF2Q9HAW0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
BRF2Q9HAW0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRF2Q9HAW0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRF2Q9HAW0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.05■□□□□ 0.96
BRF2Q9HAW0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.05■□□□□ 0.96
BRF2Q9HAW0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRF2Q9HAW0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.05■□□□□ 0.96
BRF2Q9HAW0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
BRF2Q9HAW0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms