Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AL353803.4-201ENST00000565882 1934 ntBASIC25.8■■□□□ 1.72
SH2D4AQ9H788 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SH2D4AQ9H788 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SH2D4AQ9H788 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 ABCB10P4-201ENST00000566803 2184 ntBASIC25.79■■□□□ 1.72
SH2D4AQ9H788 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 DUX4L2-201ENST00000561772 1275 ntBASIC25.79■■□□□ 1.72
SH2D4AQ9H788 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 DUX4L6-201ENST00000626483 1275 ntBASIC25.79■■□□□ 1.72
SH2D4AQ9H788 DUX4L1-201ENST00000627662 1275 ntBASIC25.79■■□□□ 1.72
SH2D4AQ9H788 DUX4L8-201ENST00000629013 1275 ntBASIC25.79■■□□□ 1.72
SH2D4AQ9H788 DUX4L3-201ENST00000630187 1275 ntBASIC25.79■■□□□ 1.72
SH2D4AQ9H788 DUX4L7-201ENST00000630678 1275 ntBASIC25.79■■□□□ 1.72
SH2D4AQ9H788 DUX4L5-201ENST00000630834 1275 ntBASIC25.79■■□□□ 1.72
SH2D4AQ9H788 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SH2D4AQ9H788 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.78■■□□□ 1.72
SH2D4AQ9H788 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SH2D4AQ9H788 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
SH2D4AQ9H788 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.78■■□□□ 1.72
SH2D4AQ9H788 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.78■■□□□ 1.72
SH2D4AQ9H788 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SH2D4AQ9H788 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.78■■□□□ 1.72
SH2D4AQ9H788 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SH2D4AQ9H788 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SH2D4AQ9H788 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.78■■□□□ 1.72
SH2D4AQ9H788 LINC02228-203ENST00000641970 1355 ntBASIC25.78■■□□□ 1.72
SH2D4AQ9H788 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SH2D4AQ9H788 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SH2D4AQ9H788 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SH2D4AQ9H788 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.78■■□□□ 1.72
SH2D4AQ9H788 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SH2D4AQ9H788 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
SH2D4AQ9H788 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SH2D4AQ9H788 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.77■■□□□ 1.72
SH2D4AQ9H788 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SH2D4AQ9H788 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.77■■□□□ 1.72
SH2D4AQ9H788 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.77■■□□□ 1.72
SH2D4AQ9H788 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SH2D4AQ9H788 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
SH2D4AQ9H788 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
SH2D4AQ9H788 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.76■■□□□ 1.71
SH2D4AQ9H788 KRT18P5-201ENST00000436075 1291 ntBASIC25.76■■□□□ 1.71
SH2D4AQ9H788 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.76■■□□□ 1.71
SH2D4AQ9H788 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.76■■□□□ 1.71
SH2D4AQ9H788 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.76■■□□□ 1.71
SH2D4AQ9H788 AC087239.1-201ENST00000622671 572 ntBASIC25.76■■□□□ 1.71
SH2D4AQ9H788 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.76■■□□□ 1.71
SH2D4AQ9H788 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SH2D4AQ9H788 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SH2D4AQ9H788 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
SH2D4AQ9H788 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
SH2D4AQ9H788 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
SH2D4AQ9H788 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.76■■□□□ 1.71
SH2D4AQ9H788 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SH2D4AQ9H788 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.75■■□□□ 1.71
SH2D4AQ9H788 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.75■■□□□ 1.71
SH2D4AQ9H788 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.75■■□□□ 1.71
SH2D4AQ9H788 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.75■■□□□ 1.71
SH2D4AQ9H788 CCDC92B-201ENST00000575506 885 ntBASIC25.75■■□□□ 1.71
SH2D4AQ9H788 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
SH2D4AQ9H788 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
SH2D4AQ9H788 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SH2D4AQ9H788 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.75■■□□□ 1.71
SH2D4AQ9H788 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.74■■□□□ 1.71
SH2D4AQ9H788 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.74■■□□□ 1.71
SH2D4AQ9H788 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SH2D4AQ9H788 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.74■■□□□ 1.71
SH2D4AQ9H788 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SH2D4AQ9H788 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SH2D4AQ9H788 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.74■■□□□ 1.71
SH2D4AQ9H788 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
SH2D4AQ9H788 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.73■■□□□ 1.71
SH2D4AQ9H788 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SH2D4AQ9H788 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.73■■□□□ 1.71
SH2D4AQ9H788 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC25.73■■□□□ 1.71
SH2D4AQ9H788 TERF1P2-201ENST00000583350 1212 ntBASIC25.73■■□□□ 1.71
SH2D4AQ9H788 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SH2D4AQ9H788 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SH2D4AQ9H788 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SH2D4AQ9H788 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SH2D4AQ9H788 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
SH2D4AQ9H788 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
SH2D4AQ9H788 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SH2D4AQ9H788 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SH2D4AQ9H788 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SH2D4AQ9H788 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms