Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TMEM38AQ9H6F2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM38AQ9H6F2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
TMEM38AQ9H6F2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM38AQ9H6F2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.58■□□□□ 0.88
TMEM38AQ9H6F2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM38AQ9H6F2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TMEM38AQ9H6F2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM38AQ9H6F2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM38AQ9H6F2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TMEM38AQ9H6F2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM38AQ9H6F2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM38AQ9H6F2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM38AQ9H6F2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEM38AQ9H6F2 LINC01960-201ENST00000563759 1884 ntBASIC20.56■□□□□ 0.88
TMEM38AQ9H6F2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM38AQ9H6F2 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.56■□□□□ 0.88
TMEM38AQ9H6F2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM38AQ9H6F2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.56■□□□□ 0.88
TMEM38AQ9H6F2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM38AQ9H6F2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
TMEM38AQ9H6F2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM38AQ9H6F2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM38AQ9H6F2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEM38AQ9H6F2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 Z92544.1-202ENST00000571933 1220 ntBASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 AC009102.2-201ENST00000606772 1639 ntBASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM38AQ9H6F2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM38AQ9H6F2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM38AQ9H6F2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM38AQ9H6F2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TMEM38AQ9H6F2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM38AQ9H6F2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM38AQ9H6F2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TMEM38AQ9H6F2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM38AQ9H6F2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.54■□□□□ 0.88
TMEM38AQ9H6F2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM38AQ9H6F2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TMEM38AQ9H6F2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM38AQ9H6F2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM38AQ9H6F2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM38AQ9H6F2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM38AQ9H6F2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM38AQ9H6F2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM38AQ9H6F2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM38AQ9H6F2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM38AQ9H6F2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.53■□□□□ 0.88
TMEM38AQ9H6F2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM38AQ9H6F2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.53■□□□□ 0.88
TMEM38AQ9H6F2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM38AQ9H6F2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM38AQ9H6F2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM38AQ9H6F2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TMEM38AQ9H6F2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM38AQ9H6F2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM38AQ9H6F2 KRT125P-201ENST00000546827 989 ntBASIC20.52■□□□□ 0.88
TMEM38AQ9H6F2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TMEM38AQ9H6F2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.52■□□□□ 0.88
TMEM38AQ9H6F2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TMEM38AQ9H6F2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.52■□□□□ 0.88
TMEM38AQ9H6F2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM38AQ9H6F2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM38AQ9H6F2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TMEM38AQ9H6F2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM38AQ9H6F2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM38AQ9H6F2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TMEM38AQ9H6F2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TMEM38AQ9H6F2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
TMEM38AQ9H6F2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TMEM38AQ9H6F2 MTDHP2-201ENST00000601468 714 ntBASIC20.51■□□□□ 0.87
TMEM38AQ9H6F2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEM38AQ9H6F2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM38AQ9H6F2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM38AQ9H6F2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM38AQ9H6F2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM38AQ9H6F2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM38AQ9H6F2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.5■□□□□ 0.87
TMEM38AQ9H6F2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM38AQ9H6F2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.5■□□□□ 0.87
TMEM38AQ9H6F2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TMEM38AQ9H6F2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM38AQ9H6F2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM38AQ9H6F2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM38AQ9H6F2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM38AQ9H6F2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms