Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
TUBB1Q9H4B7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TUBB1Q9H4B7 DUX4L4-201ENST00000566884 1269 ntBASIC21.31■■□□□ 1
TUBB1Q9H4B7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
TUBB1Q9H4B7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.31■■□□□ 1
TUBB1Q9H4B7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TUBB1Q9H4B7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TUBB1Q9H4B7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TUBB1Q9H4B7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.3■■□□□ 1
TUBB1Q9H4B7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.3■■□□□ 1
TUBB1Q9H4B7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.3■■□□□ 1
TUBB1Q9H4B7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.3■■□□□ 1
TUBB1Q9H4B7 AC092028.1-203ENST00000608262 953 ntBASIC21.3■■□□□ 1
TUBB1Q9H4B7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TUBB1Q9H4B7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TUBB1Q9H4B7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.3■■□□□ 1
TUBB1Q9H4B7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.3■■□□□ 1
TUBB1Q9H4B7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TUBB1Q9H4B7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TUBB1Q9H4B7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TUBB1Q9H4B7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TUBB1Q9H4B7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TUBB1Q9H4B7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.29■■□□□ 1
TUBB1Q9H4B7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TUBB1Q9H4B7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.29■■□□□ 1
TUBB1Q9H4B7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.29■■□□□ 1
TUBB1Q9H4B7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.29■■□□□ 1
TUBB1Q9H4B7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.29■■□□□ 1
TUBB1Q9H4B7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TUBB1Q9H4B7 AC009102.2-201ENST00000606772 1639 ntBASIC21.29■■□□□ 1
TUBB1Q9H4B7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TUBB1Q9H4B7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TUBB1Q9H4B7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TUBB1Q9H4B7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.28■■□□□ 1
TUBB1Q9H4B7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.28■■□□□ 1
TUBB1Q9H4B7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TUBB1Q9H4B7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
TUBB1Q9H4B7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.28■■□□□ 1
TUBB1Q9H4B7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.28■■□□□ 1
TUBB1Q9H4B7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.28■■□□□ 1
TUBB1Q9H4B7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.28■■□□□ 1
TUBB1Q9H4B7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.28■■□□□ 1
TUBB1Q9H4B7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TUBB1Q9H4B7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
TUBB1Q9H4B7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.28■■□□□ 1
TUBB1Q9H4B7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TUBB1Q9H4B7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
TUBB1Q9H4B7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.27■■□□□ 1
TUBB1Q9H4B7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.27■■□□□ 1
TUBB1Q9H4B7 LINC01960-201ENST00000563759 1884 ntBASIC21.27■■□□□ 1
TUBB1Q9H4B7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TUBB1Q9H4B7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TUBB1Q9H4B7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TUBB1Q9H4B7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TUBB1Q9H4B7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TUBB1Q9H4B7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.27■□□□□ 0.99
TUBB1Q9H4B7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.27■□□□□ 0.99
TUBB1Q9H4B7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
TUBB1Q9H4B7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.27■□□□□ 0.99
TUBB1Q9H4B7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.26■□□□□ 0.99
TUBB1Q9H4B7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.26■□□□□ 0.99
TUBB1Q9H4B7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.26■□□□□ 0.99
TUBB1Q9H4B7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TUBB1Q9H4B7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TUBB1Q9H4B7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBB1Q9H4B7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TUBB1Q9H4B7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBB1Q9H4B7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TUBB1Q9H4B7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.26■□□□□ 0.99
TUBB1Q9H4B7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TUBB1Q9H4B7 FBXW4P1-201ENST00000426721 2239 ntBASIC21.25■□□□□ 0.99
TUBB1Q9H4B7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.25■□□□□ 0.99
TUBB1Q9H4B7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TUBB1Q9H4B7 AC009086.3-201ENST00000623486 1008 ntBASIC21.25■□□□□ 0.99
TUBB1Q9H4B7 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.25■□□□□ 0.99
TUBB1Q9H4B7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.24■□□□□ 0.99
TUBB1Q9H4B7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TUBB1Q9H4B7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TUBB1Q9H4B7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TUBB1Q9H4B7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TUBB1Q9H4B7 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.24■□□□□ 0.99
TUBB1Q9H4B7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TUBB1Q9H4B7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.24■□□□□ 0.99
TUBB1Q9H4B7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TUBB1Q9H4B7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.24■□□□□ 0.99
TUBB1Q9H4B7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TUBB1Q9H4B7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.24■□□□□ 0.99
TUBB1Q9H4B7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.24■□□□□ 0.99
TUBB1Q9H4B7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TUBB1Q9H4B7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms