Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
NDST4Q9H3R1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
NDST4Q9H3R1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
NDST4Q9H3R1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
NDST4Q9H3R1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
NDST4Q9H3R1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
NDST4Q9H3R1 C17orf82-201ENST00000623772 1530 ntBASIC24.07■■□□□ 1.44
NDST4Q9H3R1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
NDST4Q9H3R1 CLDN5-201ENST00000403084 2357 ntBASIC24.07■■□□□ 1.44
NDST4Q9H3R1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NDST4Q9H3R1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
NDST4Q9H3R1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.06■■□□□ 1.44
NDST4Q9H3R1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NDST4Q9H3R1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NDST4Q9H3R1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NDST4Q9H3R1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NDST4Q9H3R1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NDST4Q9H3R1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.06■■□□□ 1.44
NDST4Q9H3R1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.06■■□□□ 1.44
NDST4Q9H3R1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NDST4Q9H3R1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
NDST4Q9H3R1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
NDST4Q9H3R1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.06■■□□□ 1.44
NDST4Q9H3R1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.06■■□□□ 1.44
NDST4Q9H3R1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NDST4Q9H3R1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NDST4Q9H3R1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
NDST4Q9H3R1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.05■■□□□ 1.44
NDST4Q9H3R1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NDST4Q9H3R1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.05■■□□□ 1.44
NDST4Q9H3R1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NDST4Q9H3R1 AC092053.2-201ENST00000640557 1818 ntBASIC24.05■■□□□ 1.44
NDST4Q9H3R1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NDST4Q9H3R1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.05■■□□□ 1.44
NDST4Q9H3R1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
NDST4Q9H3R1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NDST4Q9H3R1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
NDST4Q9H3R1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
NDST4Q9H3R1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
NDST4Q9H3R1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
NDST4Q9H3R1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NDST4Q9H3R1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.04■■□□□ 1.44
NDST4Q9H3R1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.03■■□□□ 1.44
NDST4Q9H3R1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
NDST4Q9H3R1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
NDST4Q9H3R1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
NDST4Q9H3R1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
NDST4Q9H3R1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NDST4Q9H3R1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.03■■□□□ 1.44
NDST4Q9H3R1 UNC93B8-201ENST00000511903 705 ntBASIC24.03■■□□□ 1.44
NDST4Q9H3R1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.03■■□□□ 1.44
NDST4Q9H3R1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
NDST4Q9H3R1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NDST4Q9H3R1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
NDST4Q9H3R1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.02■■□□□ 1.44
NDST4Q9H3R1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NDST4Q9H3R1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NDST4Q9H3R1 LINC01960-201ENST00000563759 1884 ntBASIC24.02■■□□□ 1.44
NDST4Q9H3R1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
NDST4Q9H3R1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NDST4Q9H3R1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.02■■□□□ 1.44
NDST4Q9H3R1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
NDST4Q9H3R1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.02■■□□□ 1.44
NDST4Q9H3R1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
NDST4Q9H3R1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NDST4Q9H3R1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
NDST4Q9H3R1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
NDST4Q9H3R1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NDST4Q9H3R1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
NDST4Q9H3R1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NDST4Q9H3R1 AC004687.1-201ENST00000579003 1625 ntBASIC24.01■■□□□ 1.43
NDST4Q9H3R1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NDST4Q9H3R1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NDST4Q9H3R1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NDST4Q9H3R1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NDST4Q9H3R1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
NDST4Q9H3R1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24■■□□□ 1.43
NDST4Q9H3R1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
NDST4Q9H3R1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24■■□□□ 1.43
NDST4Q9H3R1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24■■□□□ 1.43
NDST4Q9H3R1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24■■□□□ 1.43
NDST4Q9H3R1 MIR6724-1-201ENST00000616420 92 ntBASIC24■■□□□ 1.43
NDST4Q9H3R1 MIR6724-2-201ENST00000616483 92 ntBASIC24■■□□□ 1.43
NDST4Q9H3R1 MIR6724-4-201ENST00000617390 92 ntBASIC24■■□□□ 1.43
NDST4Q9H3R1 MIR6724-3-201ENST00000622482 92 ntBASIC24■■□□□ 1.43
NDST4Q9H3R1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24■■□□□ 1.43
NDST4Q9H3R1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NDST4Q9H3R1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
NDST4Q9H3R1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NDST4Q9H3R1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NDST4Q9H3R1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NDST4Q9H3R1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.99■■□□□ 1.43
NDST4Q9H3R1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NDST4Q9H3R1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NDST4Q9H3R1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.99■■□□□ 1.43
NDST4Q9H3R1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NDST4Q9H3R1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NDST4Q9H3R1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.99■■□□□ 1.43
NDST4Q9H3R1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
NDST4Q9H3R1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms