Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBQLN3Q9H347 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
UBQLN3Q9H347 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.41■□□□□ 0.86
UBQLN3Q9H347 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
UBQLN3Q9H347 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UBQLN3Q9H347 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBQLN3Q9H347 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
UBQLN3Q9H347 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.41■□□□□ 0.86
UBQLN3Q9H347 AL138724.1-201ENST00000606771 1088 ntBASIC20.41■□□□□ 0.86
UBQLN3Q9H347 AC005837.3-201ENST00000612163 286 ntBASIC20.41■□□□□ 0.86
UBQLN3Q9H347 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
UBQLN3Q9H347 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UBQLN3Q9H347 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.41■□□□□ 0.86
UBQLN3Q9H347 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
UBQLN3Q9H347 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBQLN3Q9H347 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBQLN3Q9H347 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBQLN3Q9H347 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UBQLN3Q9H347 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
UBQLN3Q9H347 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.4■□□□□ 0.86
UBQLN3Q9H347 AC006455.2-201ENST00000429931 906 ntBASIC20.4■□□□□ 0.86
UBQLN3Q9H347 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UBQLN3Q9H347 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
UBQLN3Q9H347 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
UBQLN3Q9H347 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBQLN3Q9H347 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
UBQLN3Q9H347 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBQLN3Q9H347 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBQLN3Q9H347 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBQLN3Q9H347 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBQLN3Q9H347 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBQLN3Q9H347 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBQLN3Q9H347 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.39■□□□□ 0.85
UBQLN3Q9H347 AL031432.3-201ENST00000607698 485 ntBASIC20.39■□□□□ 0.85
UBQLN3Q9H347 AC009086.3-201ENST00000623486 1008 ntBASIC20.39■□□□□ 0.85
UBQLN3Q9H347 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.39■□□□□ 0.85
UBQLN3Q9H347 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBQLN3Q9H347 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
UBQLN3Q9H347 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
UBQLN3Q9H347 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.39■□□□□ 0.85
UBQLN3Q9H347 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN3Q9H347 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.38■□□□□ 0.85
UBQLN3Q9H347 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN3Q9H347 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN3Q9H347 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN3Q9H347 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN3Q9H347 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.38■□□□□ 0.85
UBQLN3Q9H347 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
UBQLN3Q9H347 AC011298.3-201ENST00000615796 283 ntBASIC20.38■□□□□ 0.85
UBQLN3Q9H347 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.38■□□□□ 0.85
UBQLN3Q9H347 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
UBQLN3Q9H347 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBQLN3Q9H347 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
UBQLN3Q9H347 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
UBQLN3Q9H347 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.37■□□□□ 0.85
UBQLN3Q9H347 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN3Q9H347 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN3Q9H347 EDA-201ENST00000338901 1233 ntBASIC20.37■□□□□ 0.85
UBQLN3Q9H347 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.37■□□□□ 0.85
UBQLN3Q9H347 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.37■□□□□ 0.85
UBQLN3Q9H347 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.37■□□□□ 0.85
UBQLN3Q9H347 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.37■□□□□ 0.85
UBQLN3Q9H347 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN3Q9H347 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBQLN3Q9H347 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN3Q9H347 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN3Q9H347 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN3Q9H347 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.36■□□□□ 0.85
UBQLN3Q9H347 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.36■□□□□ 0.85
UBQLN3Q9H347 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.36■□□□□ 0.85
UBQLN3Q9H347 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN3Q9H347 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN3Q9H347 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.36■□□□□ 0.85
UBQLN3Q9H347 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
UBQLN3Q9H347 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.36■□□□□ 0.85
UBQLN3Q9H347 GUSBP5-202ENST00000510805 1989 ntBASIC20.35■□□□□ 0.85
UBQLN3Q9H347 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 SUDS3P1-201ENST00000505831 966 ntBASIC20.35■□□□□ 0.85
UBQLN3Q9H347 MIR3181-201ENST00000578512 73 ntBASIC20.35■□□□□ 0.85
UBQLN3Q9H347 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN3Q9H347 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN3Q9H347 FP325331.1-202ENST00000623531 1380 ntBASIC20.34■□□□□ 0.85
UBQLN3Q9H347 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN3Q9H347 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.34■□□□□ 0.85
UBQLN3Q9H347 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.34■□□□□ 0.85
UBQLN3Q9H347 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms