Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.03■□□□□ 0.96
THUMPD3Q9BV44 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
THUMPD3Q9BV44 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
THUMPD3Q9BV44 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
THUMPD3Q9BV44 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
THUMPD3Q9BV44 AC092053.2-201ENST00000640557 1818 ntBASIC21.02■□□□□ 0.96
THUMPD3Q9BV44 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
THUMPD3Q9BV44 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.02■□□□□ 0.96
THUMPD3Q9BV44 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
THUMPD3Q9BV44 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.02■□□□□ 0.96
THUMPD3Q9BV44 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.02■□□□□ 0.96
THUMPD3Q9BV44 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
THUMPD3Q9BV44 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
THUMPD3Q9BV44 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
THUMPD3Q9BV44 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
THUMPD3Q9BV44 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
THUMPD3Q9BV44 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
THUMPD3Q9BV44 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
THUMPD3Q9BV44 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.02■□□□□ 0.95
THUMPD3Q9BV44 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
THUMPD3Q9BV44 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
THUMPD3Q9BV44 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD3Q9BV44 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.01■□□□□ 0.95
THUMPD3Q9BV44 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD3Q9BV44 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD3Q9BV44 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD3Q9BV44 AC139530.1-201ENST00000575312 1977 ntBASIC21.01■□□□□ 0.95
THUMPD3Q9BV44 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD3Q9BV44 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.01■□□□□ 0.95
THUMPD3Q9BV44 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD3Q9BV44 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
THUMPD3Q9BV44 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
THUMPD3Q9BV44 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
THUMPD3Q9BV44 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21■□□□□ 0.95
THUMPD3Q9BV44 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21■□□□□ 0.95
THUMPD3Q9BV44 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
THUMPD3Q9BV44 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21■□□□□ 0.95
THUMPD3Q9BV44 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21■□□□□ 0.95
THUMPD3Q9BV44 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21■□□□□ 0.95
THUMPD3Q9BV44 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.99■□□□□ 0.95
THUMPD3Q9BV44 C11orf96-202ENST00000528572 1834 ntBASIC20.99■□□□□ 0.95
THUMPD3Q9BV44 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD3Q9BV44 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
THUMPD3Q9BV44 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD3Q9BV44 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD3Q9BV44 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD3Q9BV44 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
THUMPD3Q9BV44 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.99■□□□□ 0.95
THUMPD3Q9BV44 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
THUMPD3Q9BV44 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD3Q9BV44 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
THUMPD3Q9BV44 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
THUMPD3Q9BV44 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.98■□□□□ 0.95
THUMPD3Q9BV44 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
THUMPD3Q9BV44 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
THUMPD3Q9BV44 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
THUMPD3Q9BV44 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.97■□□□□ 0.95
THUMPD3Q9BV44 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
THUMPD3Q9BV44 AC080038.3-201ENST00000623346 1952 ntBASIC20.97■□□□□ 0.95
THUMPD3Q9BV44 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
THUMPD3Q9BV44 AC144652.1-201ENST00000609974 1624 ntBASIC20.97■□□□□ 0.95
THUMPD3Q9BV44 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
THUMPD3Q9BV44 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
THUMPD3Q9BV44 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
THUMPD3Q9BV44 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
THUMPD3Q9BV44 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.97■□□□□ 0.95
THUMPD3Q9BV44 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.97■□□□□ 0.95
THUMPD3Q9BV44 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
THUMPD3Q9BV44 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 AC137630.3-201ENST00000607245 391 ntBASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.96■□□□□ 0.95
THUMPD3Q9BV44 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
THUMPD3Q9BV44 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
THUMPD3Q9BV44 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
THUMPD3Q9BV44 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.95■□□□□ 0.94
THUMPD3Q9BV44 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
THUMPD3Q9BV44 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
THUMPD3Q9BV44 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
THUMPD3Q9BV44 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
THUMPD3Q9BV44 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
THUMPD3Q9BV44 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms