Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRAF4Q9BUZ4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAF4Q9BUZ4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAF4Q9BUZ4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF4Q9BUZ4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRAF4Q9BUZ4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAF4Q9BUZ4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAF4Q9BUZ4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 AC135279.3-201ENST00000610945 1311 ntBASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 AC142381.2-201ENST00000566120 298 ntBASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.6■□□□□ 0.73
TRAF4Q9BUZ4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF4Q9BUZ4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF4Q9BUZ4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF4Q9BUZ4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF4Q9BUZ4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
TRAF4Q9BUZ4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF4Q9BUZ4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TRAF4Q9BUZ4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF4Q9BUZ4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TRAF4Q9BUZ4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF4Q9BUZ4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF4Q9BUZ4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF4Q9BUZ4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF4Q9BUZ4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.58■□□□□ 0.72
TRAF4Q9BUZ4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAF4Q9BUZ4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF4Q9BUZ4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.58■□□□□ 0.72
TRAF4Q9BUZ4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.58■□□□□ 0.72
TRAF4Q9BUZ4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.58■□□□□ 0.72
TRAF4Q9BUZ4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF4Q9BUZ4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF4Q9BUZ4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF4Q9BUZ4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAF4Q9BUZ4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF4Q9BUZ4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF4Q9BUZ4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF4Q9BUZ4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.57■□□□□ 0.72
TRAF4Q9BUZ4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF4Q9BUZ4 AC024257.2-201ENST00000549699 147 ntBASIC19.57■□□□□ 0.72
TRAF4Q9BUZ4 AL031432.3-201ENST00000607698 485 ntBASIC19.57■□□□□ 0.72
TRAF4Q9BUZ4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TRAF4Q9BUZ4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAF4Q9BUZ4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF4Q9BUZ4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF4Q9BUZ4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF4Q9BUZ4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF4Q9BUZ4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
TRAF4Q9BUZ4 DUX4L19-201ENST00000557448 1267 ntBASIC19.56■□□□□ 0.72
TRAF4Q9BUZ4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF4Q9BUZ4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF4Q9BUZ4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF4Q9BUZ4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF4Q9BUZ4 AL022069.1-201ENST00000568025 1636 ntBASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 EDA-201ENST00000338901 1233 ntBASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 SUDS3P1-201ENST00000505831 966 ntBASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 AC092667.1-201ENST00000434301 2586 ntBASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRAF4Q9BUZ4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms