Protein–RNA interactions for Protein: Q99848

EBNA1BP2, Probable rRNA-processing protein EBP2, humanhuman

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBNA1BP2Q99848 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
EBNA1BP2Q99848 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
EBNA1BP2Q99848 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
EBNA1BP2Q99848 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
EBNA1BP2Q99848 AC009299.2-201ENST00000482477 511 ntBASIC22.3■■□□□ 1.16
EBNA1BP2Q99848 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
EBNA1BP2Q99848 AC009086.3-201ENST00000623486 1008 ntBASIC22.3■■□□□ 1.16
EBNA1BP2Q99848 AC009102.2-201ENST00000606772 1639 ntBASIC22.3■■□□□ 1.16
EBNA1BP2Q99848 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
EBNA1BP2Q99848 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
EBNA1BP2Q99848 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
EBNA1BP2Q99848 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
EBNA1BP2Q99848 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
EBNA1BP2Q99848 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
EBNA1BP2Q99848 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
EBNA1BP2Q99848 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.29■■□□□ 1.16
EBNA1BP2Q99848 C11orf96-202ENST00000528572 1834 ntBASIC22.29■■□□□ 1.16
EBNA1BP2Q99848 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
EBNA1BP2Q99848 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
EBNA1BP2Q99848 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
EBNA1BP2Q99848 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
EBNA1BP2Q99848 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.29■■□□□ 1.16
EBNA1BP2Q99848 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
EBNA1BP2Q99848 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
EBNA1BP2Q99848 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
EBNA1BP2Q99848 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
EBNA1BP2Q99848 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
EBNA1BP2Q99848 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
EBNA1BP2Q99848 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
EBNA1BP2Q99848 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
EBNA1BP2Q99848 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
EBNA1BP2Q99848 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.28■■□□□ 1.16
EBNA1BP2Q99848 MIR4787-201ENST00000607364 84 ntBASIC22.28■■□□□ 1.16
EBNA1BP2Q99848 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.28■■□□□ 1.16
EBNA1BP2Q99848 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
EBNA1BP2Q99848 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
EBNA1BP2Q99848 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
EBNA1BP2Q99848 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
EBNA1BP2Q99848 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 MTDHP2-201ENST00000601468 714 ntBASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
EBNA1BP2Q99848 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
EBNA1BP2Q99848 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
EBNA1BP2Q99848 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.26■■□□□ 1.15
EBNA1BP2Q99848 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
EBNA1BP2Q99848 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
EBNA1BP2Q99848 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.26■■□□□ 1.15
EBNA1BP2Q99848 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.26■■□□□ 1.15
EBNA1BP2Q99848 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.26■■□□□ 1.15
EBNA1BP2Q99848 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.26■■□□□ 1.15
EBNA1BP2Q99848 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
EBNA1BP2Q99848 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.25■■□□□ 1.15
EBNA1BP2Q99848 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
EBNA1BP2Q99848 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.25■■□□□ 1.15
EBNA1BP2Q99848 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
EBNA1BP2Q99848 LINC01960-201ENST00000563759 1884 ntBASIC22.25■■□□□ 1.15
EBNA1BP2Q99848 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.25■■□□□ 1.15
EBNA1BP2Q99848 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
EBNA1BP2Q99848 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
EBNA1BP2Q99848 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
EBNA1BP2Q99848 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.24■■□□□ 1.15
EBNA1BP2Q99848 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
EBNA1BP2Q99848 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
EBNA1BP2Q99848 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
EBNA1BP2Q99848 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
EBNA1BP2Q99848 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.24■■□□□ 1.15
EBNA1BP2Q99848 AL035685.1-201ENST00000636663 812 ntBASIC22.24■■□□□ 1.15
EBNA1BP2Q99848 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.24■■□□□ 1.15
EBNA1BP2Q99848 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
EBNA1BP2Q99848 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
EBNA1BP2Q99848 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
EBNA1BP2Q99848 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.24■■□□□ 1.15
EBNA1BP2Q99848 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.23■■□□□ 1.15
EBNA1BP2Q99848 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
EBNA1BP2Q99848 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
EBNA1BP2Q99848 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
EBNA1BP2Q99848 AC239859.2-201ENST00000444165 318 ntBASIC22.23■■□□□ 1.15
EBNA1BP2Q99848 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
EBNA1BP2Q99848 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
EBNA1BP2Q99848 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
EBNA1BP2Q99848 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
EBNA1BP2Q99848 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
EBNA1BP2Q99848 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
EBNA1BP2Q99848 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
EBNA1BP2Q99848 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms