Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MUC4Q99102 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MUC4Q99102 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MUC4Q99102 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MUC4Q99102 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
MUC4Q99102 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.09■□□□□ 0.17
MUC4Q99102 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MUC4Q99102 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MUC4Q99102 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
MUC4Q99102 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MUC4Q99102 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
MUC4Q99102 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MUC4Q99102 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MUC4Q99102 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.09■□□□□ 0.17
MUC4Q99102 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MUC4Q99102 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MUC4Q99102 AC005703.6-201ENST00000623265 1329 ntBASIC16.08■□□□□ 0.17
MUC4Q99102 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MUC4Q99102 AC137767.1-201ENST00000602918 1920 ntBASIC16.08■□□□□ 0.17
MUC4Q99102 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MUC4Q99102 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MUC4Q99102 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MUC4Q99102 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.08■□□□□ 0.16
MUC4Q99102 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
MUC4Q99102 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
MUC4Q99102 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MUC4Q99102 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
MUC4Q99102 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.07■□□□□ 0.16
MUC4Q99102 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MUC4Q99102 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MUC4Q99102 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MUC4Q99102 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MUC4Q99102 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MUC4Q99102 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MUC4Q99102 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MUC4Q99102 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MUC4Q99102 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.07■□□□□ 0.16
MUC4Q99102 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.07■□□□□ 0.16
MUC4Q99102 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.07■□□□□ 0.16
MUC4Q99102 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MUC4Q99102 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.07■□□□□ 0.16
MUC4Q99102 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MUC4Q99102 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MUC4Q99102 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MUC4Q99102 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MUC4Q99102 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MUC4Q99102 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
MUC4Q99102 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MUC4Q99102 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MUC4Q99102 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.06■□□□□ 0.16
MUC4Q99102 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.06■□□□□ 0.16
MUC4Q99102 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
MUC4Q99102 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.06■□□□□ 0.16
MUC4Q99102 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MUC4Q99102 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MUC4Q99102 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MUC4Q99102 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MUC4Q99102 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MUC4Q99102 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.06■□□□□ 0.16
MUC4Q99102 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC4Q99102 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MUC4Q99102 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.05■□□□□ 0.16
MUC4Q99102 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC4Q99102 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MUC4Q99102 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC4Q99102 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
MUC4Q99102 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.05■□□□□ 0.16
MUC4Q99102 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC4Q99102 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC4Q99102 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC4Q99102 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC4Q99102 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
MUC4Q99102 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
MUC4Q99102 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MUC4Q99102 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.05■□□□□ 0.16
MUC4Q99102 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MUC4Q99102 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
MUC4Q99102 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.04■□□□□ 0.16
MUC4Q99102 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.04■□□□□ 0.16
MUC4Q99102 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
MUC4Q99102 AC092666.2-201ENST00000613287 246 ntBASIC16.04■□□□□ 0.16
MUC4Q99102 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MUC4Q99102 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
MUC4Q99102 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MUC4Q99102 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MUC4Q99102 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MUC4Q99102 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.04■□□□□ 0.16
MUC4Q99102 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.04■□□□□ 0.16
MUC4Q99102 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.04■□□□□ 0.16
MUC4Q99102 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
MUC4Q99102 C11orf96-202ENST00000528572 1834 ntBASIC16.04■□□□□ 0.16
MUC4Q99102 LINC01960-201ENST00000563759 1884 ntBASIC16.04■□□□□ 0.16
MUC4Q99102 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MUC4Q99102 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.04■□□□□ 0.16
MUC4Q99102 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MUC4Q99102 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MUC4Q99102 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.03■□□□□ 0.16
MUC4Q99102 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
MUC4Q99102 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MUC4Q99102 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms