Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.93■■□□□ 1.26
CDK5RAP1Q96SZ6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDK5RAP1Q96SZ6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDK5RAP1Q96SZ6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
CDK5RAP1Q96SZ6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDK5RAP1Q96SZ6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.92■■□□□ 1.26
CDK5RAP1Q96SZ6 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.92■■□□□ 1.26
CDK5RAP1Q96SZ6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDK5RAP1Q96SZ6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.92■■□□□ 1.26
CDK5RAP1Q96SZ6 AL358852.1-201ENST00000623174 1268 ntBASIC22.92■■□□□ 1.26
CDK5RAP1Q96SZ6 AL031602.1-201ENST00000633169 911 ntBASIC22.92■■□□□ 1.26
CDK5RAP1Q96SZ6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CDK5RAP1Q96SZ6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.92■■□□□ 1.26
CDK5RAP1Q96SZ6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
CDK5RAP1Q96SZ6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
CDK5RAP1Q96SZ6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
CDK5RAP1Q96SZ6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDK5RAP1Q96SZ6 DUSP8P3-201ENST00000399571 1760 ntBASIC22.91■■□□□ 1.26
CDK5RAP1Q96SZ6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDK5RAP1Q96SZ6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
CDK5RAP1Q96SZ6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CDK5RAP1Q96SZ6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.91■■□□□ 1.26
CDK5RAP1Q96SZ6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.91■■□□□ 1.26
CDK5RAP1Q96SZ6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.9■■□□□ 1.26
CDK5RAP1Q96SZ6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.89■■□□□ 1.26
CDK5RAP1Q96SZ6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CDK5RAP1Q96SZ6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
CDK5RAP1Q96SZ6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.26
CDK5RAP1Q96SZ6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDK5RAP1Q96SZ6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
CDK5RAP1Q96SZ6 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.89■■□□□ 1.25
CDK5RAP1Q96SZ6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.89■■□□□ 1.25
CDK5RAP1Q96SZ6 AL354811.1-201ENST00000610286 706 ntBASIC22.89■■□□□ 1.25
CDK5RAP1Q96SZ6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.89■■□□□ 1.25
CDK5RAP1Q96SZ6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.89■■□□□ 1.25
CDK5RAP1Q96SZ6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CDK5RAP1Q96SZ6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
CDK5RAP1Q96SZ6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
CDK5RAP1Q96SZ6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDK5RAP1Q96SZ6 RARRES2P6-201ENST00000567333 442 ntBASIC22.88■■□□□ 1.25
CDK5RAP1Q96SZ6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.88■■□□□ 1.25
CDK5RAP1Q96SZ6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CDK5RAP1Q96SZ6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDK5RAP1Q96SZ6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDK5RAP1Q96SZ6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDK5RAP1Q96SZ6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CDK5RAP1Q96SZ6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.87■■□□□ 1.25
CDK5RAP1Q96SZ6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.87■■□□□ 1.25
CDK5RAP1Q96SZ6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDK5RAP1Q96SZ6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.87■■□□□ 1.25
CDK5RAP1Q96SZ6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
CDK5RAP1Q96SZ6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.87■■□□□ 1.25
CDK5RAP1Q96SZ6 AC010141.3-201ENST00000456659 717 ntBASIC22.87■■□□□ 1.25
CDK5RAP1Q96SZ6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.87■■□□□ 1.25
CDK5RAP1Q96SZ6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.87■■□□□ 1.25
CDK5RAP1Q96SZ6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.87■■□□□ 1.25
CDK5RAP1Q96SZ6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.87■■□□□ 1.25
CDK5RAP1Q96SZ6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDK5RAP1Q96SZ6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDK5RAP1Q96SZ6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDK5RAP1Q96SZ6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.86■■□□□ 1.25
CDK5RAP1Q96SZ6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CDK5RAP1Q96SZ6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDK5RAP1Q96SZ6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.86■■□□□ 1.25
CDK5RAP1Q96SZ6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.86■■□□□ 1.25
CDK5RAP1Q96SZ6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDK5RAP1Q96SZ6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDK5RAP1Q96SZ6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.86■■□□□ 1.25
CDK5RAP1Q96SZ6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
CDK5RAP1Q96SZ6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms