Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
CLCC1Q96S66 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCC1Q96S66 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCC1Q96S66 LINC00526-201ENST00000581067 1875 ntBASIC18.41■□□□□ 0.54
CLCC1Q96S66 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.41■□□□□ 0.54
CLCC1Q96S66 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CLCC1Q96S66 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLCC1Q96S66 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCC1Q96S66 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCC1Q96S66 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCC1Q96S66 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCC1Q96S66 KRT18P24-201ENST00000344739 1156 ntBASIC18.41■□□□□ 0.54
CLCC1Q96S66 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCC1Q96S66 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCC1Q96S66 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCC1Q96S66 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.41■□□□□ 0.54
CLCC1Q96S66 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLCC1Q96S66 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCC1Q96S66 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCC1Q96S66 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCC1Q96S66 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCC1Q96S66 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLCC1Q96S66 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLCC1Q96S66 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCC1Q96S66 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCC1Q96S66 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCC1Q96S66 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCC1Q96S66 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCC1Q96S66 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCC1Q96S66 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCC1Q96S66 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CLCC1Q96S66 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCC1Q96S66 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCC1Q96S66 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCC1Q96S66 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCC1Q96S66 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCC1Q96S66 AC127496.7-201ENST00000625110 1798 ntBASIC18.4■□□□□ 0.54
CLCC1Q96S66 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.39■□□□□ 0.54
CLCC1Q96S66 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CLCC1Q96S66 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCC1Q96S66 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCC1Q96S66 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLCC1Q96S66 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.39■□□□□ 0.53
CLCC1Q96S66 AC103724.3-201ENST00000564481 992 ntBASIC18.39■□□□□ 0.53
CLCC1Q96S66 MIR4281-201ENST00000580852 62 ntBASIC18.39■□□□□ 0.53
CLCC1Q96S66 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCC1Q96S66 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCC1Q96S66 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.39■□□□□ 0.53
CLCC1Q96S66 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.39■□□□□ 0.53
CLCC1Q96S66 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CLCC1Q96S66 AIRN-201ENST00000601203 4374 ntBASIC18.39■□□□□ 0.53
CLCC1Q96S66 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.39■□□□□ 0.53
CLCC1Q96S66 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLCC1Q96S66 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCC1Q96S66 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.38■□□□□ 0.53
CLCC1Q96S66 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CLCC1Q96S66 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCC1Q96S66 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCC1Q96S66 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCC1Q96S66 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CLCC1Q96S66 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCC1Q96S66 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CLCC1Q96S66 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCC1Q96S66 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCC1Q96S66 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCC1Q96S66 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CLCC1Q96S66 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCC1Q96S66 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCC1Q96S66 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CLCC1Q96S66 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CLCC1Q96S66 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCC1Q96S66 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCC1Q96S66 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCC1Q96S66 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCC1Q96S66 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLCC1Q96S66 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCC1Q96S66 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.37■□□□□ 0.53
CLCC1Q96S66 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCC1Q96S66 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.37■□□□□ 0.53
CLCC1Q96S66 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCC1Q96S66 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLCC1Q96S66 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.37■□□□□ 0.53
CLCC1Q96S66 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCC1Q96S66 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CLCC1Q96S66 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.37■□□□□ 0.53
CLCC1Q96S66 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCC1Q96S66 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLCC1Q96S66 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCC1Q96S66 ANOS2P-203ENST00000472227 1816 ntBASIC18.37■□□□□ 0.53
CLCC1Q96S66 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCC1Q96S66 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCC1Q96S66 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCC1Q96S66 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CLCC1Q96S66 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLCC1Q96S66 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CLCC1Q96S66 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCC1Q96S66 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCC1Q96S66 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCC1Q96S66 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCC1Q96S66 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms