Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40CQ96S21 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40CQ96S21 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.85■□□□□ 0.45
RAB40CQ96S21 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40CQ96S21 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RAB40CQ96S21 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40CQ96S21 SPCS2P3-201ENST00000500401 656 ntBASIC17.85■□□□□ 0.45
RAB40CQ96S21 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40CQ96S21 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.85■□□□□ 0.45
RAB40CQ96S21 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40CQ96S21 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40CQ96S21 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RAB40CQ96S21 AC026310.3-201ENST00000625186 2373 ntBASIC17.84■□□□□ 0.45
RAB40CQ96S21 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40CQ96S21 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40CQ96S21 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40CQ96S21 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB40CQ96S21 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40CQ96S21 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB40CQ96S21 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RAB40CQ96S21 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.84■□□□□ 0.45
RAB40CQ96S21 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RAB40CQ96S21 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40CQ96S21 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RAB40CQ96S21 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RAB40CQ96S21 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40CQ96S21 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB40CQ96S21 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAB40CQ96S21 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB40CQ96S21 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB40CQ96S21 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.83■□□□□ 0.45
RAB40CQ96S21 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB40CQ96S21 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RAB40CQ96S21 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB40CQ96S21 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB40CQ96S21 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB40CQ96S21 AL592293.1-201ENST00000502889 1188 ntBASIC17.83■□□□□ 0.44
RAB40CQ96S21 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.83■□□□□ 0.44
RAB40CQ96S21 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.83■□□□□ 0.44
RAB40CQ96S21 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RAB40CQ96S21 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RAB40CQ96S21 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB40CQ96S21 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RAB40CQ96S21 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.82■□□□□ 0.44
RAB40CQ96S21 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RAB40CQ96S21 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.82■□□□□ 0.44
RAB40CQ96S21 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40CQ96S21 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40CQ96S21 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
RAB40CQ96S21 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RAB40CQ96S21 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB40CQ96S21 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40CQ96S21 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40CQ96S21 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40CQ96S21 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40CQ96S21 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB40CQ96S21 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.82■□□□□ 0.44
RAB40CQ96S21 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40CQ96S21 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40CQ96S21 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40CQ96S21 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40CQ96S21 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RAB40CQ96S21 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB40CQ96S21 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40CQ96S21 AC022616.5-201ENST00000518796 181 ntBASIC17.81■□□□□ 0.44
RAB40CQ96S21 ABHD17AP5-201ENST00000580133 923 ntBASIC17.81■□□□□ 0.44
RAB40CQ96S21 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RAB40CQ96S21 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40CQ96S21 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB40CQ96S21 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB40CQ96S21 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RAB40CQ96S21 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40CQ96S21 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB40CQ96S21 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RAB40CQ96S21 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB40CQ96S21 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40CQ96S21 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RAB40CQ96S21 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40CQ96S21 U85056.1-201ENST00000616429 682 ntBASIC17.8■□□□□ 0.44
RAB40CQ96S21 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RAB40CQ96S21 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40CQ96S21 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40CQ96S21 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB40CQ96S21 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40CQ96S21 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB40CQ96S21 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB40CQ96S21 FAM99A-202ENST00000538190 1989 ntBASIC17.79■□□□□ 0.44
RAB40CQ96S21 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40CQ96S21 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40CQ96S21 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB40CQ96S21 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB40CQ96S21 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB40CQ96S21 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB40CQ96S21 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB40CQ96S21 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RAB40CQ96S21 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB40CQ96S21 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB40CQ96S21 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAB40CQ96S21 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.78■□□□□ 0.44
RAB40CQ96S21 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms