Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BBS4Q96RK4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BBS4Q96RK4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BBS4Q96RK4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
BBS4Q96RK4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
BBS4Q96RK4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.84■□□□□ 0.93
BBS4Q96RK4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BBS4Q96RK4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BBS4Q96RK4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
BBS4Q96RK4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BBS4Q96RK4 AC241377.3-202ENST00000626088 1088 ntBASIC20.84■□□□□ 0.93
BBS4Q96RK4 AC241585.3-202ENST00000628937 1088 ntBASIC20.84■□□□□ 0.93
BBS4Q96RK4 AC245100.8-202ENST00000629247 1058 ntBASIC20.84■□□□□ 0.93
BBS4Q96RK4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BBS4Q96RK4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.84■□□□□ 0.93
BBS4Q96RK4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
BBS4Q96RK4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BBS4Q96RK4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
BBS4Q96RK4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BBS4Q96RK4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.83■□□□□ 0.93
BBS4Q96RK4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BBS4Q96RK4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
BBS4Q96RK4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BBS4Q96RK4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BBS4Q96RK4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
BBS4Q96RK4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
BBS4Q96RK4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
BBS4Q96RK4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BBS4Q96RK4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
BBS4Q96RK4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BBS4Q96RK4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BBS4Q96RK4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BBS4Q96RK4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
BBS4Q96RK4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BBS4Q96RK4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.83■□□□□ 0.92
BBS4Q96RK4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
BBS4Q96RK4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BBS4Q96RK4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.82■□□□□ 0.92
BBS4Q96RK4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BBS4Q96RK4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.82■□□□□ 0.92
BBS4Q96RK4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BBS4Q96RK4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BBS4Q96RK4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BBS4Q96RK4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
BBS4Q96RK4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BBS4Q96RK4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.82■□□□□ 0.92
BBS4Q96RK4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BBS4Q96RK4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.82■□□□□ 0.92
BBS4Q96RK4 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.82■□□□□ 0.92
BBS4Q96RK4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
BBS4Q96RK4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BBS4Q96RK4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BBS4Q96RK4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.82■□□□□ 0.92
BBS4Q96RK4 AL117328.2-201ENST00000624617 1940 ntBASIC20.82■□□□□ 0.92
BBS4Q96RK4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.82■□□□□ 0.92
BBS4Q96RK4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BBS4Q96RK4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BBS4Q96RK4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
BBS4Q96RK4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.81■□□□□ 0.92
BBS4Q96RK4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.81■□□□□ 0.92
BBS4Q96RK4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BBS4Q96RK4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BBS4Q96RK4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BBS4Q96RK4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BBS4Q96RK4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.81■□□□□ 0.92
BBS4Q96RK4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.81■□□□□ 0.92
BBS4Q96RK4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
BBS4Q96RK4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BBS4Q96RK4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BBS4Q96RK4 AC004687.1-201ENST00000579003 1625 ntBASIC20.81■□□□□ 0.92
BBS4Q96RK4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BBS4Q96RK4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BBS4Q96RK4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
BBS4Q96RK4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BBS4Q96RK4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BBS4Q96RK4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.8■□□□□ 0.92
BBS4Q96RK4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BBS4Q96RK4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BBS4Q96RK4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.8■□□□□ 0.92
BBS4Q96RK4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BBS4Q96RK4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BBS4Q96RK4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BBS4Q96RK4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BBS4Q96RK4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.79■□□□□ 0.92
BBS4Q96RK4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
BBS4Q96RK4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.79■□□□□ 0.92
BBS4Q96RK4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
BBS4Q96RK4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
BBS4Q96RK4 SRD5A1P1-201ENST00000442297 786 ntBASIC20.79■□□□□ 0.92
BBS4Q96RK4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.79■□□□□ 0.92
BBS4Q96RK4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.79■□□□□ 0.92
BBS4Q96RK4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.79■□□□□ 0.92
BBS4Q96RK4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BBS4Q96RK4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BBS4Q96RK4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BBS4Q96RK4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BBS4Q96RK4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BBS4Q96RK4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BBS4Q96RK4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BBS4Q96RK4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms