Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX3Q96PT4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.1■□□□□ 0.33
DUX3Q96PT4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX3Q96PT4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.1■□□□□ 0.33
DUX3Q96PT4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX3Q96PT4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.1■□□□□ 0.33
DUX3Q96PT4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
DUX3Q96PT4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX3Q96PT4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX3Q96PT4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX3Q96PT4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.09■□□□□ 0.33
DUX3Q96PT4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DUX3Q96PT4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.09■□□□□ 0.33
DUX3Q96PT4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.09■□□□□ 0.33
DUX3Q96PT4 AC087623.3-201ENST00000607047 1098 ntBASIC17.09■□□□□ 0.33
DUX3Q96PT4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX3Q96PT4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DUX3Q96PT4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX3Q96PT4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX3Q96PT4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.09■□□□□ 0.33
DUX3Q96PT4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX3Q96PT4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DUX3Q96PT4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DUX3Q96PT4 AL353803.4-201ENST00000565882 1934 ntBASIC17.08■□□□□ 0.33
DUX3Q96PT4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.08■□□□□ 0.33
DUX3Q96PT4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DUX3Q96PT4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.08■□□□□ 0.33
DUX3Q96PT4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DUX3Q96PT4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DUX3Q96PT4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.08■□□□□ 0.33
DUX3Q96PT4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX3Q96PT4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.08■□□□□ 0.32
DUX3Q96PT4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX3Q96PT4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX3Q96PT4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DUX3Q96PT4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
DUX3Q96PT4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
DUX3Q96PT4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX3Q96PT4 MIR5787-201ENST00000611784 55 ntBASIC17.08■□□□□ 0.32
DUX3Q96PT4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX3Q96PT4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
DUX3Q96PT4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
DUX3Q96PT4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.08■□□□□ 0.32
DUX3Q96PT4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.07■□□□□ 0.32
DUX3Q96PT4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
DUX3Q96PT4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DUX3Q96PT4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
DUX3Q96PT4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX3Q96PT4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.07■□□□□ 0.32
DUX3Q96PT4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.07■□□□□ 0.32
DUX3Q96PT4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX3Q96PT4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX3Q96PT4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
DUX3Q96PT4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
DUX3Q96PT4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX3Q96PT4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.07■□□□□ 0.32
DUX3Q96PT4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.07■□□□□ 0.32
DUX3Q96PT4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
DUX3Q96PT4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX3Q96PT4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.07■□□□□ 0.32
DUX3Q96PT4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX3Q96PT4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX3Q96PT4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.07■□□□□ 0.32
DUX3Q96PT4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.07■□□□□ 0.32
DUX3Q96PT4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX3Q96PT4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX3Q96PT4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX3Q96PT4 AC004687.1-201ENST00000579003 1625 ntBASIC17.07■□□□□ 0.32
DUX3Q96PT4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUX3Q96PT4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUX3Q96PT4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX3Q96PT4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX3Q96PT4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX3Q96PT4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUX3Q96PT4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
DUX3Q96PT4 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.06■□□□□ 0.32
DUX3Q96PT4 AC092666.2-201ENST00000613287 246 ntBASIC17.06■□□□□ 0.32
DUX3Q96PT4 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.06■□□□□ 0.32
DUX3Q96PT4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.06■□□□□ 0.32
DUX3Q96PT4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.06■□□□□ 0.32
DUX3Q96PT4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX3Q96PT4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
DUX3Q96PT4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
DUX3Q96PT4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX3Q96PT4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX3Q96PT4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX3Q96PT4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.05■□□□□ 0.32
DUX3Q96PT4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.05■□□□□ 0.32
DUX3Q96PT4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DUX3Q96PT4 MIR6084-201ENST00000622012 110 ntBASIC17.05■□□□□ 0.32
DUX3Q96PT4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
DUX3Q96PT4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
DUX3Q96PT4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DUX3Q96PT4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DUX3Q96PT4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX3Q96PT4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
DUX3Q96PT4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX3Q96PT4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX3Q96PT4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX3Q96PT4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms