Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.61■■□□□ 1.05
PDLIM5Q96HC4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.61■■□□□ 1.05
PDLIM5Q96HC4 AL512631.2-201ENST00000604634 923 ntBASIC21.61■■□□□ 1.05
PDLIM5Q96HC4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM5Q96HC4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM5Q96HC4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM5Q96HC4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PDLIM5Q96HC4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PDLIM5Q96HC4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM5Q96HC4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM5Q96HC4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM5Q96HC4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM5Q96HC4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM5Q96HC4 LINC01960-201ENST00000563759 1884 ntBASIC21.6■■□□□ 1.05
PDLIM5Q96HC4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PDLIM5Q96HC4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.6■■□□□ 1.05
PDLIM5Q96HC4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM5Q96HC4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM5Q96HC4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.6■■□□□ 1.05
PDLIM5Q96HC4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM5Q96HC4 EP400NL-214ENST00000641289 2402 ntBASIC21.6■■□□□ 1.05
PDLIM5Q96HC4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM5Q96HC4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
PDLIM5Q96HC4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PDLIM5Q96HC4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.6■■□□□ 1.05
PDLIM5Q96HC4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PDLIM5Q96HC4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM5Q96HC4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDLIM5Q96HC4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.58■■□□□ 1.05
PDLIM5Q96HC4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDLIM5Q96HC4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDLIM5Q96HC4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDLIM5Q96HC4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDLIM5Q96HC4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDLIM5Q96HC4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.58■■□□□ 1.04
PDLIM5Q96HC4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDLIM5Q96HC4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDLIM5Q96HC4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDLIM5Q96HC4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDLIM5Q96HC4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PDLIM5Q96HC4 AC139530.1-201ENST00000575312 1977 ntBASIC21.57■■□□□ 1.04
PDLIM5Q96HC4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM5Q96HC4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM5Q96HC4 AC099791.2-201ENST00000605725 427 ntBASIC21.57■■□□□ 1.04
PDLIM5Q96HC4 CA15P2-201ENST00000611168 834 ntBASIC21.57■■□□□ 1.04
PDLIM5Q96HC4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM5Q96HC4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM5Q96HC4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PDLIM5Q96HC4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM5Q96HC4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDLIM5Q96HC4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
PDLIM5Q96HC4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM5Q96HC4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.56■■□□□ 1.04
PDLIM5Q96HC4 AC006455.2-201ENST00000429931 906 ntBASIC21.56■■□□□ 1.04
PDLIM5Q96HC4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM5Q96HC4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.56■■□□□ 1.04
PDLIM5Q96HC4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
PDLIM5Q96HC4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.56■■□□□ 1.04
PDLIM5Q96HC4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM5Q96HC4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDLIM5Q96HC4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 SRD5A1P1-201ENST00000442297 786 ntBASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 AC092171.4-201ENST00000609130 632 ntBASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 AC080038.3-201ENST00000623346 1952 ntBASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 AC133637.1-201ENST00000624115 1537 ntBASIC21.55■■□□□ 1.04
PDLIM5Q96HC4 CLDN5-201ENST00000403084 2357 ntBASIC21.54■■□□□ 1.04
PDLIM5Q96HC4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM5Q96HC4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDLIM5Q96HC4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PDLIM5Q96HC4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms