Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 pRNA.5-201ENST00000612139 90 ntBASIC28.48■■■□□ 2.15
ZNF428Q96B54 pRNA.11-201ENST00000618423 90 ntBASIC28.48■■■□□ 2.15
ZNF428Q96B54 pRNA.13-201ENST00000619112 90 ntBASIC28.48■■■□□ 2.15
ZNF428Q96B54 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
ZNF428Q96B54 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC28.48■■■□□ 2.15
ZNF428Q96B54 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ZNF428Q96B54 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC28.47■■■□□ 2.15
ZNF428Q96B54 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
ZNF428Q96B54 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ZNF428Q96B54 ME2-208ENST00000638937 2471 ntTSL 5 BASIC28.47■■■□□ 2.15
ZNF428Q96B54 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
ZNF428Q96B54 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC28.47■■■□□ 2.15
ZNF428Q96B54 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
ZNF428Q96B54 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
ZNF428Q96B54 AC068473.5-201ENST00000616428 2072 ntBASIC28.46■■■□□ 2.15
ZNF428Q96B54 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC28.46■■■□□ 2.15
ZNF428Q96B54 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
ZNF428Q96B54 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC28.46■■■□□ 2.15
ZNF428Q96B54 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
ZNF428Q96B54 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
ZNF428Q96B54 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
ZNF428Q96B54 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
ZNF428Q96B54 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC28.45■■■□□ 2.15
ZNF428Q96B54 AC133637.1-201ENST00000624115 1537 ntBASIC28.45■■■□□ 2.15
ZNF428Q96B54 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC28.45■■■□□ 2.15
ZNF428Q96B54 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
ZNF428Q96B54 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
ZNF428Q96B54 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.45■■■□□ 2.14
ZNF428Q96B54 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC28.45■■■□□ 2.14
ZNF428Q96B54 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ZNF428Q96B54 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
ZNF428Q96B54 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
ZNF428Q96B54 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
ZNF428Q96B54 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
ZNF428Q96B54 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
ZNF428Q96B54 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC28.44■■■□□ 2.14
ZNF428Q96B54 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC28.44■■■□□ 2.14
ZNF428Q96B54 AC091305.1-201ENST00000479476 895 ntBASIC28.44■■■□□ 2.14
ZNF428Q96B54 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC28.44■■■□□ 2.14
ZNF428Q96B54 AC011298.3-201ENST00000615796 283 ntBASIC28.44■■■□□ 2.14
ZNF428Q96B54 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC28.44■■■□□ 2.14
ZNF428Q96B54 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC28.44■■■□□ 2.14
ZNF428Q96B54 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
ZNF428Q96B54 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC28.44■■■□□ 2.14
ZNF428Q96B54 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
ZNF428Q96B54 AC012676.1-201ENST00000574705 1949 ntBASIC28.43■■■□□ 2.14
ZNF428Q96B54 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC28.43■■■□□ 2.14
ZNF428Q96B54 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
ZNF428Q96B54 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
ZNF428Q96B54 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
ZNF428Q96B54 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ZNF428Q96B54 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ZNF428Q96B54 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC28.42■■■□□ 2.14
ZNF428Q96B54 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
ZNF428Q96B54 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ZNF428Q96B54 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ZNF428Q96B54 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC28.42■■■□□ 2.14
ZNF428Q96B54 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ZNF428Q96B54 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC28.42■■■□□ 2.14
ZNF428Q96B54 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ZNF428Q96B54 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC28.42■■■□□ 2.14
ZNF428Q96B54 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ZNF428Q96B54 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
ZNF428Q96B54 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
ZNF428Q96B54 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ZNF428Q96B54 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
ZNF428Q96B54 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC28.41■■■□□ 2.14
ZNF428Q96B54 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
ZNF428Q96B54 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ZNF428Q96B54 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ZNF428Q96B54 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ZNF428Q96B54 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ZNF428Q96B54 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC28.4■■■□□ 2.14
ZNF428Q96B54 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
ZNF428Q96B54 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
ZNF428Q96B54 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC28.4■■■□□ 2.14
ZNF428Q96B54 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC28.4■■■□□ 2.14
ZNF428Q96B54 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
ZNF428Q96B54 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC28.39■■■□□ 2.14
ZNF428Q96B54 RASA4CP-201ENST00000424092 1398 ntBASIC28.39■■■□□ 2.14
ZNF428Q96B54 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
ZNF428Q96B54 AC136469.2-201ENST00000623944 1028 ntBASIC28.39■■■□□ 2.14
ZNF428Q96B54 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
ZNF428Q96B54 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC28.39■■■□□ 2.13
ZNF428Q96B54 AC004687.1-201ENST00000579003 1625 ntBASIC28.39■■■□□ 2.13
ZNF428Q96B54 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC28.39■■■□□ 2.13
ZNF428Q96B54 C9orf163-202ENST00000624034 2573 ntBASIC28.39■■■□□ 2.13
ZNF428Q96B54 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
ZNF428Q96B54 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
ZNF428Q96B54 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ZNF428Q96B54 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC28.38■■■□□ 2.13
ZNF428Q96B54 ESRRAP2-201ENST00000418437 1549 ntBASIC28.38■■■□□ 2.13
ZNF428Q96B54 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
ZNF428Q96B54 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC28.37■■■□□ 2.13
ZNF428Q96B54 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC28.37■■■□□ 2.13
ZNF428Q96B54 AC027682.1-201ENST00000562846 899 ntBASIC28.37■■■□□ 2.13
ZNF428Q96B54 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
ZNF428Q96B54 AC092666.2-201ENST00000613287 246 ntBASIC28.37■■■□□ 2.13
ZNF428Q96B54 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC28.37■■■□□ 2.13
ZNF428Q96B54 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms