Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC092053.2-201ENST00000640557 1818 ntBASIC19.44■□□□□ 0.7
RFT1Q96AA3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFT1Q96AA3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.44■□□□□ 0.7
RFT1Q96AA3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFT1Q96AA3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.44■□□□□ 0.7
RFT1Q96AA3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.44■□□□□ 0.7
RFT1Q96AA3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.44■□□□□ 0.7
RFT1Q96AA3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.44■□□□□ 0.7
RFT1Q96AA3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFT1Q96AA3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFT1Q96AA3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFT1Q96AA3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFT1Q96AA3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFT1Q96AA3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFT1Q96AA3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.43■□□□□ 0.7
RFT1Q96AA3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.43■□□□□ 0.7
RFT1Q96AA3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFT1Q96AA3 TSPY13P-201ENST00000338964 914 ntBASIC19.43■□□□□ 0.7
RFT1Q96AA3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.43■□□□□ 0.7
RFT1Q96AA3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.43■□□□□ 0.7
RFT1Q96AA3 THA1P-201ENST00000590384 1145 ntBASIC19.43■□□□□ 0.7
RFT1Q96AA3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFT1Q96AA3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFT1Q96AA3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFT1Q96AA3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFT1Q96AA3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.43■□□□□ 0.7
RFT1Q96AA3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFT1Q96AA3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFT1Q96AA3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFT1Q96AA3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFT1Q96AA3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFT1Q96AA3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RFT1Q96AA3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.42■□□□□ 0.7
RFT1Q96AA3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.42■□□□□ 0.7
RFT1Q96AA3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFT1Q96AA3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFT1Q96AA3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFT1Q96AA3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.42■□□□□ 0.7
RFT1Q96AA3 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.42■□□□□ 0.7
RFT1Q96AA3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFT1Q96AA3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.42■□□□□ 0.7
RFT1Q96AA3 MIR4281-201ENST00000580852 62 ntBASIC19.42■□□□□ 0.7
RFT1Q96AA3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RFT1Q96AA3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
RFT1Q96AA3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFT1Q96AA3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RFT1Q96AA3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFT1Q96AA3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.41■□□□□ 0.7
RFT1Q96AA3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFT1Q96AA3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFT1Q96AA3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFT1Q96AA3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFT1Q96AA3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.41■□□□□ 0.7
RFT1Q96AA3 FBXW4P1-201ENST00000426721 2239 ntBASIC19.41■□□□□ 0.7
RFT1Q96AA3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.4■□□□□ 0.7
RFT1Q96AA3 AF131216.4-201ENST00000638924 1588 ntBASIC19.4■□□□□ 0.7
RFT1Q96AA3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFT1Q96AA3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFT1Q96AA3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RFT1Q96AA3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RFT1Q96AA3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.4■□□□□ 0.7
RFT1Q96AA3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.4■□□□□ 0.7
RFT1Q96AA3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.4■□□□□ 0.7
RFT1Q96AA3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RFT1Q96AA3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFT1Q96AA3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RFT1Q96AA3 AC139530.1-201ENST00000575312 1977 ntBASIC19.39■□□□□ 0.7
RFT1Q96AA3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RFT1Q96AA3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFT1Q96AA3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.39■□□□□ 0.69
RFT1Q96AA3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.39■□□□□ 0.69
RFT1Q96AA3 AC074183.2-201ENST00000623112 922 ntBASIC19.39■□□□□ 0.69
RFT1Q96AA3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RFT1Q96AA3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RFT1Q96AA3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.39■□□□□ 0.69
RFT1Q96AA3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFT1Q96AA3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.39■□□□□ 0.69
RFT1Q96AA3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.39■□□□□ 0.69
RFT1Q96AA3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RFT1Q96AA3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFT1Q96AA3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFT1Q96AA3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFT1Q96AA3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFT1Q96AA3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFT1Q96AA3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.38■□□□□ 0.69
RFT1Q96AA3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFT1Q96AA3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.38■□□□□ 0.69
RFT1Q96AA3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RFT1Q96AA3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFT1Q96AA3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFT1Q96AA3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFT1Q96AA3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFT1Q96AA3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RFT1Q96AA3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFT1Q96AA3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RFT1Q96AA3 KRT18P24-201ENST00000344739 1156 ntBASIC19.37■□□□□ 0.69
RFT1Q96AA3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.37■□□□□ 0.69
RFT1Q96AA3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFT1Q96AA3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFT1Q96AA3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms