Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.27■■□□□ 1
NCLNQ969V3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NCLNQ969V3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NCLNQ969V3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NCLNQ969V3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NCLNQ969V3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCLNQ969V3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.26■□□□□ 0.99
NCLNQ969V3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
NCLNQ969V3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCLNQ969V3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
NCLNQ969V3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCLNQ969V3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.26■□□□□ 0.99
NCLNQ969V3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.26■□□□□ 0.99
NCLNQ969V3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.26■□□□□ 0.99
NCLNQ969V3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCLNQ969V3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
NCLNQ969V3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
NCLNQ969V3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
NCLNQ969V3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCLNQ969V3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCLNQ969V3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCLNQ969V3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLNQ969V3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLNQ969V3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLNQ969V3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.25■□□□□ 0.99
NCLNQ969V3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLNQ969V3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLNQ969V3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.25■□□□□ 0.99
NCLNQ969V3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLNQ969V3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.25■□□□□ 0.99
NCLNQ969V3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
NCLNQ969V3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLNQ969V3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NCLNQ969V3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLNQ969V3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLNQ969V3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCLNQ969V3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
NCLNQ969V3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
NCLNQ969V3 LINC00526-201ENST00000581067 1875 ntBASIC21.24■□□□□ 0.99
NCLNQ969V3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.24■□□□□ 0.99
NCLNQ969V3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.24■□□□□ 0.99
NCLNQ969V3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
NCLNQ969V3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCLNQ969V3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCLNQ969V3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCLNQ969V3 ALDH1A3-203ENST00000557963 1670 ntBASIC21.24■□□□□ 0.99
NCLNQ969V3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCLNQ969V3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.24■□□□□ 0.99
NCLNQ969V3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NCLNQ969V3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCLNQ969V3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.23■□□□□ 0.99
NCLNQ969V3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NCLNQ969V3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCLNQ969V3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCLNQ969V3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCLNQ969V3 AC008406.3-201ENST00000620001 1374 ntBASIC21.23■□□□□ 0.99
NCLNQ969V3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCLNQ969V3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.22■□□□□ 0.99
NCLNQ969V3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.22■□□□□ 0.99
NCLNQ969V3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.22■□□□□ 0.99
NCLNQ969V3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.22■□□□□ 0.99
NCLNQ969V3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.22■□□□□ 0.99
NCLNQ969V3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NCLNQ969V3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCLNQ969V3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCLNQ969V3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NCLNQ969V3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NCLNQ969V3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCLNQ969V3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCLNQ969V3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.22■□□□□ 0.99
NCLNQ969V3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NCLNQ969V3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCLNQ969V3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCLNQ969V3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCLNQ969V3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NCLNQ969V3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCLNQ969V3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCLNQ969V3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NCLNQ969V3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NCLNQ969V3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NCLNQ969V3 AC131281.2-201ENST00000520478 145 ntBASIC21.21■□□□□ 0.99
NCLNQ969V3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCLNQ969V3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCLNQ969V3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NCLNQ969V3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCLNQ969V3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCLNQ969V3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NCLNQ969V3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NCLNQ969V3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.2■□□□□ 0.98
NCLNQ969V3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NCLNQ969V3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
NCLNQ969V3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NCLNQ969V3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NCLNQ969V3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCLNQ969V3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NCLNQ969V3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
NCLNQ969V3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCLNQ969V3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCLNQ969V3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCLNQ969V3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms