Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.98■□□□□ 0.95
TTC9Q92623 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TTC9Q92623 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.98■□□□□ 0.95
TTC9Q92623 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC9Q92623 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TTC9Q92623 pRNA.6-201ENST00000610482 90 ntBASIC20.98■□□□□ 0.95
TTC9Q92623 pRNA.5-201ENST00000612139 90 ntBASIC20.98■□□□□ 0.95
TTC9Q92623 pRNA.11-201ENST00000618423 90 ntBASIC20.98■□□□□ 0.95
TTC9Q92623 pRNA.13-201ENST00000619112 90 ntBASIC20.98■□□□□ 0.95
TTC9Q92623 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC9Q92623 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC9Q92623 LINC02228-203ENST00000641970 1355 ntBASIC20.97■□□□□ 0.95
TTC9Q92623 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TTC9Q92623 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.97■□□□□ 0.95
TTC9Q92623 ALDH1A3-203ENST00000557963 1670 ntBASIC20.97■□□□□ 0.95
TTC9Q92623 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC9Q92623 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
TTC9Q92623 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.97■□□□□ 0.95
TTC9Q92623 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.97■□□□□ 0.95
TTC9Q92623 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.97■□□□□ 0.95
TTC9Q92623 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TTC9Q92623 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.97■□□□□ 0.95
TTC9Q92623 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.97■□□□□ 0.95
TTC9Q92623 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC9Q92623 AC068473.5-201ENST00000616428 2072 ntBASIC20.97■□□□□ 0.95
TTC9Q92623 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC9Q92623 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC9Q92623 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.96■□□□□ 0.95
TTC9Q92623 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
TTC9Q92623 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.96■□□□□ 0.95
TTC9Q92623 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC9Q92623 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.96■□□□□ 0.95
TTC9Q92623 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.96■□□□□ 0.95
TTC9Q92623 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TTC9Q92623 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TTC9Q92623 TMEM191A-211ENST00000637163 1067 ntBASIC20.96■□□□□ 0.95
TTC9Q92623 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
TTC9Q92623 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC9Q92623 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TTC9Q92623 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC9Q92623 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC9Q92623 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.95■□□□□ 0.94
TTC9Q92623 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC9Q92623 AC006015.1-201ENST00000429970 570 ntBASIC20.95■□□□□ 0.94
TTC9Q92623 CDCA4P2-201ENST00000441182 718 ntBASIC20.95■□□□□ 0.94
TTC9Q92623 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TTC9Q92623 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TTC9Q92623 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.95■□□□□ 0.94
TTC9Q92623 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC9Q92623 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC9Q92623 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC9Q92623 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TTC9Q92623 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.94■□□□□ 0.94
TTC9Q92623 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TTC9Q92623 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TTC9Q92623 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.94■□□□□ 0.94
TTC9Q92623 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC9Q92623 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TTC9Q92623 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TTC9Q92623 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TTC9Q92623 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC9Q92623 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TTC9Q92623 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.94■□□□□ 0.94
TTC9Q92623 AC104771.1-201ENST00000603335 964 ntBASIC20.94■□□□□ 0.94
TTC9Q92623 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.94■□□□□ 0.94
TTC9Q92623 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC9Q92623 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.94■□□□□ 0.94
TTC9Q92623 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TTC9Q92623 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC9Q92623 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TTC9Q92623 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.94■□□□□ 0.94
TTC9Q92623 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.94■□□□□ 0.94
TTC9Q92623 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC9Q92623 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TTC9Q92623 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TTC9Q92623 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC9Q92623 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC9Q92623 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.93■□□□□ 0.94
TTC9Q92623 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC9Q92623 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.93■□□□□ 0.94
TTC9Q92623 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC9Q92623 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.93■□□□□ 0.94
TTC9Q92623 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TTC9Q92623 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.93■□□□□ 0.94
TTC9Q92623 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TTC9Q92623 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.93■□□□□ 0.94
TTC9Q92623 AC073111.5-205ENST00000641717 521 ntBASIC20.93■□□□□ 0.94
TTC9Q92623 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TTC9Q92623 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.93■□□□□ 0.94
TTC9Q92623 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.92■□□□□ 0.94
TTC9Q92623 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TTC9Q92623 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
TTC9Q92623 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.92■□□□□ 0.94
TTC9Q92623 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC9Q92623 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.92■□□□□ 0.94
TTC9Q92623 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.92■□□□□ 0.94
TTC9Q92623 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TTC9Q92623 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC9Q92623 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.92■□□□□ 0.94
TTC9Q92623 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms