Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
RAPGEF4Q8WZA2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RAPGEF4Q8WZA2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RAPGEF4Q8WZA2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RAPGEF4Q8WZA2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RAPGEF4Q8WZA2 AC006015.1-201ENST00000429970 570 ntBASIC29.22■■■□□ 2.27
RAPGEF4Q8WZA2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RAPGEF4Q8WZA2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC29.22■■■□□ 2.27
RAPGEF4Q8WZA2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RAPGEF4Q8WZA2 AC004687.1-201ENST00000579003 1625 ntBASIC29.21■■■□□ 2.27
RAPGEF4Q8WZA2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC29.21■■■□□ 2.27
RAPGEF4Q8WZA2 AC080038.1-201ENST00000611274 1154 ntBASIC29.21■■■□□ 2.27
RAPGEF4Q8WZA2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
RAPGEF4Q8WZA2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.27
RAPGEF4Q8WZA2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
RAPGEF4Q8WZA2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC29.2■■■□□ 2.27
RAPGEF4Q8WZA2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
RAPGEF4Q8WZA2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
RAPGEF4Q8WZA2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC29.2■■■□□ 2.26
RAPGEF4Q8WZA2 AC137761.2-201ENST00000561729 223 ntBASIC29.2■■■□□ 2.26
RAPGEF4Q8WZA2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC29.2■■■□□ 2.26
RAPGEF4Q8WZA2 AC145350.3-201ENST00000569033 163 ntBASIC29.2■■■□□ 2.26
RAPGEF4Q8WZA2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
RAPGEF4Q8WZA2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
RAPGEF4Q8WZA2 AC079630.1-202ENST00000618127 1840 ntBASIC29.2■■■□□ 2.26
RAPGEF4Q8WZA2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
RAPGEF4Q8WZA2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
RAPGEF4Q8WZA2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
RAPGEF4Q8WZA2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RAPGEF4Q8WZA2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC29.19■■■□□ 2.26
RAPGEF4Q8WZA2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
RAPGEF4Q8WZA2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC29.19■■■□□ 2.26
RAPGEF4Q8WZA2 AC016769.1-201ENST00000409132 1010 ntBASIC29.19■■■□□ 2.26
RAPGEF4Q8WZA2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
RAPGEF4Q8WZA2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC29.19■■■□□ 2.26
RAPGEF4Q8WZA2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC29.19■■■□□ 2.26
RAPGEF4Q8WZA2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
RAPGEF4Q8WZA2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
RAPGEF4Q8WZA2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
RAPGEF4Q8WZA2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC29.18■■■□□ 2.26
RAPGEF4Q8WZA2 COX20-201ENST00000366528 568 ntTSL 2 BASIC29.18■■■□□ 2.26
RAPGEF4Q8WZA2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
RAPGEF4Q8WZA2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC29.18■■■□□ 2.26
RAPGEF4Q8WZA2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
RAPGEF4Q8WZA2 AC068587.7-201ENST00000641602 218 ntBASIC29.18■■■□□ 2.26
RAPGEF4Q8WZA2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
RAPGEF4Q8WZA2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
RAPGEF4Q8WZA2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC29.17■■■□□ 2.26
RAPGEF4Q8WZA2 BX005040.4-201ENST00000637145 1518 ntBASIC29.17■■■□□ 2.26
RAPGEF4Q8WZA2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
RAPGEF4Q8WZA2 HLA-L-209ENST00000420110 1011 ntBASIC29.17■■■□□ 2.26
RAPGEF4Q8WZA2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
RAPGEF4Q8WZA2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC29.17■■■□□ 2.26
RAPGEF4Q8WZA2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
RAPGEF4Q8WZA2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC29.17■■■□□ 2.26
RAPGEF4Q8WZA2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC29.16■■■□□ 2.26
RAPGEF4Q8WZA2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
RAPGEF4Q8WZA2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC29.16■■■□□ 2.26
RAPGEF4Q8WZA2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC29.16■■■□□ 2.26
RAPGEF4Q8WZA2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC29.16■■■□□ 2.26
RAPGEF4Q8WZA2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC29.16■■■□□ 2.26
RAPGEF4Q8WZA2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC29.16■■■□□ 2.26
RAPGEF4Q8WZA2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
RAPGEF4Q8WZA2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
RAPGEF4Q8WZA2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC29.16■■■□□ 2.26
RAPGEF4Q8WZA2 AP004607.4-201ENST00000530158 1459 ntBASIC29.16■■■□□ 2.26
RAPGEF4Q8WZA2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
RAPGEF4Q8WZA2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC29.15■■■□□ 2.26
RAPGEF4Q8WZA2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC29.15■■■□□ 2.26
RAPGEF4Q8WZA2 DBI-210ENST00000542275 757 ntTSL 5 BASIC29.15■■■□□ 2.26
RAPGEF4Q8WZA2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC29.15■■■□□ 2.26
RAPGEF4Q8WZA2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
RAPGEF4Q8WZA2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
RAPGEF4Q8WZA2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
RAPGEF4Q8WZA2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
RAPGEF4Q8WZA2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC29.14■■■□□ 2.26
RAPGEF4Q8WZA2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
RAPGEF4Q8WZA2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC29.14■■■□□ 2.26
RAPGEF4Q8WZA2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
RAPGEF4Q8WZA2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
RAPGEF4Q8WZA2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
RAPGEF4Q8WZA2 AC004854.2-201ENST00000608450 1441 ntBASIC29.13■■■□□ 2.25
RAPGEF4Q8WZA2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC29.13■■■□□ 2.25
RAPGEF4Q8WZA2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC29.13■■■□□ 2.25
RAPGEF4Q8WZA2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC29.13■■■□□ 2.25
RAPGEF4Q8WZA2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC29.13■■■□□ 2.25
RAPGEF4Q8WZA2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
RAPGEF4Q8WZA2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
RAPGEF4Q8WZA2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms