Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.33■□□□□ 0.68
RAB40AQ8WXH6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
RAB40AQ8WXH6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40AQ8WXH6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40AQ8WXH6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB40AQ8WXH6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40AQ8WXH6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40AQ8WXH6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40AQ8WXH6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40AQ8WXH6 AL137060.1-201ENST00000618151 2648 ntBASIC19.32■□□□□ 0.68
RAB40AQ8WXH6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40AQ8WXH6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40AQ8WXH6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.32■□□□□ 0.68
RAB40AQ8WXH6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB40AQ8WXH6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RAB40AQ8WXH6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RAB40AQ8WXH6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40AQ8WXH6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40AQ8WXH6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40AQ8WXH6 AC139530.1-201ENST00000575312 1977 ntBASIC19.32■□□□□ 0.68
RAB40AQ8WXH6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40AQ8WXH6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40AQ8WXH6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RAB40AQ8WXH6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40AQ8WXH6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB40AQ8WXH6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40AQ8WXH6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40AQ8WXH6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40AQ8WXH6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.31■□□□□ 0.68
RAB40AQ8WXH6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40AQ8WXH6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40AQ8WXH6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40AQ8WXH6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40AQ8WXH6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40AQ8WXH6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.3■□□□□ 0.68
RAB40AQ8WXH6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB40AQ8WXH6 AC092028.1-203ENST00000608262 953 ntBASIC19.3■□□□□ 0.68
RAB40AQ8WXH6 AC131212.1-201ENST00000613771 668 ntBASIC19.3■□□□□ 0.68
RAB40AQ8WXH6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RAB40AQ8WXH6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RAB40AQ8WXH6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40AQ8WXH6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB40AQ8WXH6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40AQ8WXH6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40AQ8WXH6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40AQ8WXH6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40AQ8WXH6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB40AQ8WXH6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.29■□□□□ 0.68
RAB40AQ8WXH6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
RAB40AQ8WXH6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40AQ8WXH6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.29■□□□□ 0.68
RAB40AQ8WXH6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB40AQ8WXH6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40AQ8WXH6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RAB40AQ8WXH6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40AQ8WXH6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 TSPY9P-201ENST00000440215 945 ntBASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 TSPY11P-201ENST00000442607 1045 ntBASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 UNC93B8-201ENST00000511903 705 ntBASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RAB40AQ8WXH6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40AQ8WXH6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB40AQ8WXH6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RAB40AQ8WXH6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB40AQ8WXH6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40AQ8WXH6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40AQ8WXH6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40AQ8WXH6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RAB40AQ8WXH6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40AQ8WXH6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB40AQ8WXH6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RAB40AQ8WXH6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RAB40AQ8WXH6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RAB40AQ8WXH6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40AQ8WXH6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
RAB40AQ8WXH6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.27■□□□□ 0.67
RAB40AQ8WXH6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RAB40AQ8WXH6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB40AQ8WXH6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB40AQ8WXH6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB40AQ8WXH6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms