Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 AC009299.2-201ENST00000482477 511 ntBASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 SNX5-217ENST00000606557 1087 ntBASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.51■□□□□ 0.55
RTN4IP1Q8WWV3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 KRT125P-201ENST00000546827 989 ntBASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4IP1Q8WWV3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.49■□□□□ 0.55
RTN4IP1Q8WWV3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.49■□□□□ 0.55
RTN4IP1Q8WWV3 AC092053.2-201ENST00000640557 1818 ntBASIC18.49■□□□□ 0.55
RTN4IP1Q8WWV3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.49■□□□□ 0.55
RTN4IP1Q8WWV3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.49■□□□□ 0.55
RTN4IP1Q8WWV3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.49■□□□□ 0.55
RTN4IP1Q8WWV3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4IP1Q8WWV3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.49■□□□□ 0.55
RTN4IP1Q8WWV3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4IP1Q8WWV3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4IP1Q8WWV3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4IP1Q8WWV3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4IP1Q8WWV3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 C11orf96-202ENST00000528572 1834 ntBASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4IP1Q8WWV3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4IP1Q8WWV3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4IP1Q8WWV3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RTN4IP1Q8WWV3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RTN4IP1Q8WWV3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.47■□□□□ 0.55
RTN4IP1Q8WWV3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4IP1Q8WWV3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4IP1Q8WWV3 AL137060.1-201ENST00000618151 2648 ntBASIC18.47■□□□□ 0.55
RTN4IP1Q8WWV3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4IP1Q8WWV3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RTN4IP1Q8WWV3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 AC139530.1-201ENST00000575312 1977 ntBASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 AC239859.2-201ENST00000444165 318 ntBASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RTN4IP1Q8WWV3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
RTN4IP1Q8WWV3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 MIR4787-201ENST00000607364 84 ntBASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN4IP1Q8WWV3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms