Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM4Q8WVI0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 AC092667.1-201ENST00000434301 2586 ntBASIC18.87■□□□□ 0.61
SMIM4Q8WVI0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 AC244015.2-201ENST00000616358 1861 ntBASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.86■□□□□ 0.61
SMIM4Q8WVI0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.85■□□□□ 0.61
SMIM4Q8WVI0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SMIM4Q8WVI0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM4Q8WVI0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM4Q8WVI0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM4Q8WVI0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SMIM4Q8WVI0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM4Q8WVI0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.85■□□□□ 0.61
SMIM4Q8WVI0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 RPS2P35-201ENST00000443417 897 ntBASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.84■□□□□ 0.61
SMIM4Q8WVI0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMIM4Q8WVI0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMIM4Q8WVI0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
SMIM4Q8WVI0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMIM4Q8WVI0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMIM4Q8WVI0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SMIM4Q8WVI0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.83■□□□□ 0.6
SMIM4Q8WVI0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SMIM4Q8WVI0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM4Q8WVI0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM4Q8WVI0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM4Q8WVI0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM4Q8WVI0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM4Q8WVI0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
SMIM4Q8WVI0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SMIM4Q8WVI0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
SMIM4Q8WVI0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM4Q8WVI0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM4Q8WVI0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM4Q8WVI0 AC022413.1-201ENST00000624602 984 ntBASIC18.82■□□□□ 0.6
SMIM4Q8WVI0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.82■□□□□ 0.6
SMIM4Q8WVI0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.82■□□□□ 0.6
SMIM4Q8WVI0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.82■□□□□ 0.6
SMIM4Q8WVI0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 AC011551.1-201ENST00000614101 683 ntBASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SMIM4Q8WVI0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms