Protein–RNA interactions for Protein: Q8TF40

FNIP1, Folliculin-interacting protein 1, humanhuman

Predictions only

Length 1,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNIP1Q8TF40 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
FNIP1Q8TF40 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
FNIP1Q8TF40 LINC01960-201ENST00000563759 1884 ntBASIC23.07■■□□□ 1.28
FNIP1Q8TF40 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.07■■□□□ 1.28
FNIP1Q8TF40 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
FNIP1Q8TF40 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.07■■□□□ 1.28
FNIP1Q8TF40 AC099791.2-201ENST00000605725 427 ntBASIC23.07■■□□□ 1.28
FNIP1Q8TF40 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
FNIP1Q8TF40 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
FNIP1Q8TF40 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
FNIP1Q8TF40 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.07■■□□□ 1.28
FNIP1Q8TF40 AC006455.2-201ENST00000429931 906 ntBASIC23.06■■□□□ 1.28
FNIP1Q8TF40 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.06■■□□□ 1.28
FNIP1Q8TF40 SRD5A1P1-201ENST00000442297 786 ntBASIC23.06■■□□□ 1.28
FNIP1Q8TF40 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
FNIP1Q8TF40 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.06■■□□□ 1.28
FNIP1Q8TF40 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.06■■□□□ 1.28
FNIP1Q8TF40 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
FNIP1Q8TF40 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
FNIP1Q8TF40 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
FNIP1Q8TF40 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
FNIP1Q8TF40 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.05■■□□□ 1.28
FNIP1Q8TF40 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
FNIP1Q8TF40 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.05■■□□□ 1.28
FNIP1Q8TF40 AC092171.4-201ENST00000609130 632 ntBASIC23.05■■□□□ 1.28
FNIP1Q8TF40 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.05■■□□□ 1.28
FNIP1Q8TF40 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.05■■□□□ 1.28
FNIP1Q8TF40 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
FNIP1Q8TF40 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
FNIP1Q8TF40 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
FNIP1Q8TF40 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
FNIP1Q8TF40 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
FNIP1Q8TF40 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 LINC00526-201ENST00000581067 1875 ntBASIC23.04■■□□□ 1.28
FNIP1Q8TF40 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
FNIP1Q8TF40 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNIP1Q8TF40 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNIP1Q8TF40 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
FNIP1Q8TF40 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNIP1Q8TF40 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.03■■□□□ 1.28
FNIP1Q8TF40 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNIP1Q8TF40 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNIP1Q8TF40 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
FNIP1Q8TF40 pRNA.6-201ENST00000610482 90 ntBASIC23.03■■□□□ 1.28
FNIP1Q8TF40 pRNA.5-201ENST00000612139 90 ntBASIC23.03■■□□□ 1.28
FNIP1Q8TF40 pRNA.11-201ENST00000618423 90 ntBASIC23.03■■□□□ 1.28
FNIP1Q8TF40 pRNA.13-201ENST00000619112 90 ntBASIC23.03■■□□□ 1.28
FNIP1Q8TF40 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
FNIP1Q8TF40 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
FNIP1Q8TF40 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNIP1Q8TF40 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FNIP1Q8TF40 AC133637.1-201ENST00000624115 1537 ntBASIC23.03■■□□□ 1.28
FNIP1Q8TF40 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
FNIP1Q8TF40 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNIP1Q8TF40 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNIP1Q8TF40 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNIP1Q8TF40 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNIP1Q8TF40 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNIP1Q8TF40 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FNIP1Q8TF40 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FNIP1Q8TF40 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.02■■□□□ 1.28
FNIP1Q8TF40 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.02■■□□□ 1.28
FNIP1Q8TF40 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
FNIP1Q8TF40 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNIP1Q8TF40 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
FNIP1Q8TF40 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FNIP1Q8TF40 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
FNIP1Q8TF40 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.01■■□□□ 1.27
FNIP1Q8TF40 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FNIP1Q8TF40 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FNIP1Q8TF40 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FNIP1Q8TF40 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.01■■□□□ 1.27
FNIP1Q8TF40 CA15P2-201ENST00000611168 834 ntBASIC23.01■■□□□ 1.27
FNIP1Q8TF40 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FNIP1Q8TF40 AC139530.1-201ENST00000575312 1977 ntBASIC23.01■■□□□ 1.27
FNIP1Q8TF40 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
FNIP1Q8TF40 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
FNIP1Q8TF40 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
FNIP1Q8TF40 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FNIP1Q8TF40 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
FNIP1Q8TF40 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FNIP1Q8TF40 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FNIP1Q8TF40 EP400NL-214ENST00000641289 2402 ntBASIC23■■□□□ 1.27
FNIP1Q8TF40 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
FNIP1Q8TF40 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23■■□□□ 1.27
FNIP1Q8TF40 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms