Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 AC010542.4-201ENST00000563151 1910 ntBASIC21.76■■□□□ 1.07
RFWD2Q8NHY2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.76■■□□□ 1.07
RFWD2Q8NHY2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.76■■□□□ 1.07
RFWD2Q8NHY2 NTF6A-201ENST00000591175 560 ntBASIC21.76■■□□□ 1.07
RFWD2Q8NHY2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RFWD2Q8NHY2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFWD2Q8NHY2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.76■■□□□ 1.07
RFWD2Q8NHY2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RFWD2Q8NHY2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.75■■□□□ 1.07
RFWD2Q8NHY2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.75■■□□□ 1.07
RFWD2Q8NHY2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFWD2Q8NHY2 DUX4L9-201ENST00000449051 1259 ntBASIC21.75■■□□□ 1.07
RFWD2Q8NHY2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFWD2Q8NHY2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
RFWD2Q8NHY2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFWD2Q8NHY2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.75■■□□□ 1.07
RFWD2Q8NHY2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFWD2Q8NHY2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFWD2Q8NHY2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.75■■□□□ 1.07
RFWD2Q8NHY2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFWD2Q8NHY2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 AC005229.4-201ENST00000610085 2198 ntBASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 AC129492.7-201ENST00000622992 756 ntBASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RFWD2Q8NHY2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFWD2Q8NHY2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.73■■□□□ 1.07
RFWD2Q8NHY2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFWD2Q8NHY2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RFWD2Q8NHY2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFWD2Q8NHY2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.73■■□□□ 1.07
RFWD2Q8NHY2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.73■■□□□ 1.07
RFWD2Q8NHY2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFWD2Q8NHY2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RFWD2Q8NHY2 AC073130.3-201ENST00000624389 2278 ntBASIC21.73■■□□□ 1.07
RFWD2Q8NHY2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.73■■□□□ 1.07
RFWD2Q8NHY2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 LONRF2P2-201ENST00000439212 571 ntBASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 MIR6765-201ENST00000614092 87 ntBASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 AC011551.1-201ENST00000614101 683 ntBASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD2Q8NHY2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD2Q8NHY2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD2Q8NHY2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD2Q8NHY2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD2Q8NHY2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RFWD2Q8NHY2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD2Q8NHY2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD2Q8NHY2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RFWD2Q8NHY2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.71■■□□□ 1.07
RFWD2Q8NHY2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD2Q8NHY2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.71■■□□□ 1.07
RFWD2Q8NHY2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.71■■□□□ 1.07
RFWD2Q8NHY2 PKD1P6-201ENST00000343738 4769 ntBASIC21.71■■□□□ 1.07
RFWD2Q8NHY2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
RFWD2Q8NHY2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
RFWD2Q8NHY2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFWD2Q8NHY2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.7■■□□□ 1.06
RFWD2Q8NHY2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.7■■□□□ 1.06
RFWD2Q8NHY2 DUX4L18-201ENST00000553347 1267 ntBASIC21.7■■□□□ 1.06
RFWD2Q8NHY2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFWD2Q8NHY2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFWD2Q8NHY2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.7■■□□□ 1.06
RFWD2Q8NHY2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFWD2Q8NHY2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFWD2Q8NHY2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.7■■□□□ 1.06
RFWD2Q8NHY2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFWD2Q8NHY2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RFWD2Q8NHY2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.69■■□□□ 1.06
RFWD2Q8NHY2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFWD2Q8NHY2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFWD2Q8NHY2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.69■■□□□ 1.06
RFWD2Q8NHY2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.69■■□□□ 1.06
RFWD2Q8NHY2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RFWD2Q8NHY2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RFWD2Q8NHY2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms