Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DNAAF1Q8NEP3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DNAAF1Q8NEP3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNAAF1Q8NEP3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNAAF1Q8NEP3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DNAAF1Q8NEP3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNAAF1Q8NEP3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.34■□□□□ 0.69
DNAAF1Q8NEP3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.33■□□□□ 0.69
DNAAF1Q8NEP3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.33■□□□□ 0.69
DNAAF1Q8NEP3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DNAAF1Q8NEP3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DNAAF1Q8NEP3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DNAAF1Q8NEP3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DNAAF1Q8NEP3 YBX1P4-201ENST00000392794 808 ntBASIC19.33■□□□□ 0.68
DNAAF1Q8NEP3 AC103834.1-201ENST00000520383 144 ntBASIC19.33■□□□□ 0.68
DNAAF1Q8NEP3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.33■□□□□ 0.68
DNAAF1Q8NEP3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
DNAAF1Q8NEP3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DNAAF1Q8NEP3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
DNAAF1Q8NEP3 AC080038.3-201ENST00000623346 1952 ntBASIC19.33■□□□□ 0.68
DNAAF1Q8NEP3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
DNAAF1Q8NEP3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DNAAF1Q8NEP3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
DNAAF1Q8NEP3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 C11orf96-202ENST00000528572 1834 ntBASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 AC092053.2-201ENST00000640557 1818 ntBASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
DNAAF1Q8NEP3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.3■□□□□ 0.68
DNAAF1Q8NEP3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
DNAAF1Q8NEP3 AC103724.3-201ENST00000564481 992 ntBASIC19.3■□□□□ 0.68
DNAAF1Q8NEP3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
DNAAF1Q8NEP3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.3■□□□□ 0.68
DNAAF1Q8NEP3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DNAAF1Q8NEP3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DNAAF1Q8NEP3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
DNAAF1Q8NEP3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.3■□□□□ 0.68
DNAAF1Q8NEP3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DNAAF1Q8NEP3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
DNAAF1Q8NEP3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.29■□□□□ 0.68
DNAAF1Q8NEP3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.29■□□□□ 0.68
DNAAF1Q8NEP3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DNAAF1Q8NEP3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DNAAF1Q8NEP3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
DNAAF1Q8NEP3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.29■□□□□ 0.68
DNAAF1Q8NEP3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.29■□□□□ 0.68
DNAAF1Q8NEP3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.29■□□□□ 0.68
DNAAF1Q8NEP3 AC137630.3-201ENST00000607245 391 ntBASIC19.29■□□□□ 0.68
DNAAF1Q8NEP3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
DNAAF1Q8NEP3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
DNAAF1Q8NEP3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DNAAF1Q8NEP3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DNAAF1Q8NEP3 FBXW4P1-201ENST00000426721 2239 ntBASIC19.28■□□□□ 0.68
DNAAF1Q8NEP3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DNAAF1Q8NEP3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNAAF1Q8NEP3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNAAF1Q8NEP3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
DNAAF1Q8NEP3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNAAF1Q8NEP3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
DNAAF1Q8NEP3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNAAF1Q8NEP3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.28■□□□□ 0.68
DNAAF1Q8NEP3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
DNAAF1Q8NEP3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DNAAF1Q8NEP3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DNAAF1Q8NEP3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
DNAAF1Q8NEP3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms