Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 AP005435.1-201ENST00000529293 1178 ntBASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 AL499627.2-201ENST00000606283 725 ntBASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 AL139125.2-201ENST00000623134 1869 ntBASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF248Q8NDW4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF248Q8NDW4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF248Q8NDW4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF248Q8NDW4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF248Q8NDW4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF248Q8NDW4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF248Q8NDW4 AC006970.2-201ENST00000450065 779 ntBASIC21.05■□□□□ 0.96
ZNF248Q8NDW4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF248Q8NDW4 AC010525.1-201ENST00000585559 441 ntBASIC21.05■□□□□ 0.96
ZNF248Q8NDW4 BID-214ENST00000617586 542 ntTSL 5 BASIC21.05■□□□□ 0.96
ZNF248Q8NDW4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 ESRRAP2-201ENST00000418437 1549 ntBASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 TMEM191A-211ENST00000637163 1067 ntBASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 ALDH1A3-203ENST00000557963 1670 ntBASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF248Q8NDW4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 AL355802.2-201ENST00000402069 882 ntBASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 AL109923.1-201ENST00000618799 583 ntBASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF248Q8NDW4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF248Q8NDW4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ZNF248Q8NDW4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF248Q8NDW4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF248Q8NDW4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF248Q8NDW4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ZNF248Q8NDW4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF248Q8NDW4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms