Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC168Q8NDH2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC168Q8NDH2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC168Q8NDH2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC168Q8NDH2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC168Q8NDH2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC168Q8NDH2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC168Q8NDH2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC168Q8NDH2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC168Q8NDH2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC168Q8NDH2 AL596275.1-201ENST00000423464 877 ntBASIC18.65■□□□□ 0.58
CCDC168Q8NDH2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC168Q8NDH2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC168Q8NDH2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC168Q8NDH2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CCDC168Q8NDH2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC168Q8NDH2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC168Q8NDH2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC168Q8NDH2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC168Q8NDH2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CCDC168Q8NDH2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CCDC168Q8NDH2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.64■□□□□ 0.58
CCDC168Q8NDH2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.64■□□□□ 0.58
CCDC168Q8NDH2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CCDC168Q8NDH2 AC133041.1-202ENST00000642053 222 ntBASIC18.64■□□□□ 0.58
CCDC168Q8NDH2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC168Q8NDH2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC168Q8NDH2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC168Q8NDH2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC168Q8NDH2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC168Q8NDH2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC168Q8NDH2 DUSP5P2-201ENST00000426873 1033 ntBASIC18.64■□□□□ 0.57
CCDC168Q8NDH2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC168Q8NDH2 UBE2DNL-204ENST00000602536 740 ntBASIC18.64■□□□□ 0.57
CCDC168Q8NDH2 AC092118.2-201ENST00000613495 667 ntBASIC18.64■□□□□ 0.57
CCDC168Q8NDH2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC168Q8NDH2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 AC231657.2-201ENST00000624556 255 ntBASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC168Q8NDH2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC168Q8NDH2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC168Q8NDH2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC168Q8NDH2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC168Q8NDH2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC168Q8NDH2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC168Q8NDH2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC168Q8NDH2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC168Q8NDH2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC168Q8NDH2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC168Q8NDH2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC168Q8NDH2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC168Q8NDH2 AC133552.2-202ENST00000575694 574 ntBASIC18.62■□□□□ 0.57
CCDC168Q8NDH2 AP006294.2-201ENST00000641667 209 ntBASIC18.62■□□□□ 0.57
CCDC168Q8NDH2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC168Q8NDH2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC168Q8NDH2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC168Q8NDH2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC168Q8NDH2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC168Q8NDH2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC168Q8NDH2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.61■□□□□ 0.57
CCDC168Q8NDH2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC168Q8NDH2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC168Q8NDH2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC168Q8NDH2 AC008550.1-201ENST00000511500 884 ntBASIC18.61■□□□□ 0.57
CCDC168Q8NDH2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC168Q8NDH2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC168Q8NDH2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 AC135731.1-201ENST00000569415 2548 ntBASIC18.6■□□□□ 0.57
CCDC168Q8NDH2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC168Q8NDH2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms