Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDRT4Q8N9R6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDRT4Q8N9R6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.51■□□□□ 0.87
CDRT4Q8N9R6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDRT4Q8N9R6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.51■□□□□ 0.87
CDRT4Q8N9R6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CDRT4Q8N9R6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 AC131281.2-201ENST00000520478 145 ntBASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 MIR4466-201ENST00000606121 54 ntBASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 pRNA.6-201ENST00000610482 90 ntBASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 pRNA.5-201ENST00000612139 90 ntBASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 pRNA.11-201ENST00000618423 90 ntBASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 pRNA.13-201ENST00000619112 90 ntBASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDRT4Q8N9R6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 AL117328.2-201ENST00000624617 1940 ntBASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 AC127496.7-201ENST00000625110 1798 ntBASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDRT4Q8N9R6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDRT4Q8N9R6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDRT4Q8N9R6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.48■□□□□ 0.87
CDRT4Q8N9R6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CDRT4Q8N9R6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDRT4Q8N9R6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDRT4Q8N9R6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.48■□□□□ 0.87
CDRT4Q8N9R6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDRT4Q8N9R6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDRT4Q8N9R6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDRT4Q8N9R6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CDRT4Q8N9R6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDRT4Q8N9R6 AC133637.1-201ENST00000624115 1537 ntBASIC20.48■□□□□ 0.87
CDRT4Q8N9R6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CDRT4Q8N9R6 LINC01960-201ENST00000563759 1884 ntBASIC20.47■□□□□ 0.87
CDRT4Q8N9R6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT4Q8N9R6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT4Q8N9R6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT4Q8N9R6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT4Q8N9R6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT4Q8N9R6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT4Q8N9R6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT4Q8N9R6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.47■□□□□ 0.87
CDRT4Q8N9R6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.47■□□□□ 0.87
CDRT4Q8N9R6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT4Q8N9R6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT4Q8N9R6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT4Q8N9R6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDRT4Q8N9R6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDRT4Q8N9R6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDRT4Q8N9R6 GUSBP5-202ENST00000510805 1989 ntBASIC20.46■□□□□ 0.87
CDRT4Q8N9R6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.46■□□□□ 0.87
CDRT4Q8N9R6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDRT4Q8N9R6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.46■□□□□ 0.87
CDRT4Q8N9R6 DUX4L19-201ENST00000557448 1267 ntBASIC20.46■□□□□ 0.87
CDRT4Q8N9R6 MIR3181-201ENST00000578512 73 ntBASIC20.46■□□□□ 0.87
CDRT4Q8N9R6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDRT4Q8N9R6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDRT4Q8N9R6 AC087742.1-201ENST00000575880 1738 ntBASIC20.46■□□□□ 0.87
CDRT4Q8N9R6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.46■□□□□ 0.87
CDRT4Q8N9R6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDRT4Q8N9R6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CDRT4Q8N9R6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDRT4Q8N9R6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.45■□□□□ 0.86
CDRT4Q8N9R6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDRT4Q8N9R6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.45■□□□□ 0.86
CDRT4Q8N9R6 AC131212.1-201ENST00000613771 668 ntBASIC20.45■□□□□ 0.86
CDRT4Q8N9R6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.45■□□□□ 0.86
CDRT4Q8N9R6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.45■□□□□ 0.86
CDRT4Q8N9R6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDRT4Q8N9R6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDRT4Q8N9R6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDRT4Q8N9R6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDRT4Q8N9R6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDRT4Q8N9R6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDRT4Q8N9R6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.44■□□□□ 0.86
CDRT4Q8N9R6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDRT4Q8N9R6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms