Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.29■□□□□ 0.52
C11orf42Q8N5U0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
C11orf42Q8N5U0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C11orf42Q8N5U0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.29■□□□□ 0.52
C11orf42Q8N5U0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C11orf42Q8N5U0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.28■□□□□ 0.52
C11orf42Q8N5U0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.28■□□□□ 0.52
C11orf42Q8N5U0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.28■□□□□ 0.52
C11orf42Q8N5U0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
C11orf42Q8N5U0 SERBP1P1-201ENST00000396021 1160 ntBASIC18.28■□□□□ 0.52
C11orf42Q8N5U0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.28■□□□□ 0.52
C11orf42Q8N5U0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.28■□□□□ 0.52
C11orf42Q8N5U0 MIR3181-201ENST00000578512 73 ntBASIC18.28■□□□□ 0.52
C11orf42Q8N5U0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C11orf42Q8N5U0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.28■□□□□ 0.52
C11orf42Q8N5U0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
C11orf42Q8N5U0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C11orf42Q8N5U0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
C11orf42Q8N5U0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
C11orf42Q8N5U0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
C11orf42Q8N5U0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
C11orf42Q8N5U0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.27■□□□□ 0.52
C11orf42Q8N5U0 SYT6-210ENST00000641643 1587 ntBASIC18.27■□□□□ 0.52
C11orf42Q8N5U0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C11orf42Q8N5U0 UNC93B3-201ENST00000308076 687 ntBASIC18.27■□□□□ 0.52
C11orf42Q8N5U0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C11orf42Q8N5U0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.27■□□□□ 0.52
C11orf42Q8N5U0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C11orf42Q8N5U0 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.27■□□□□ 0.52
C11orf42Q8N5U0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
C11orf42Q8N5U0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.27■□□□□ 0.51
C11orf42Q8N5U0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
C11orf42Q8N5U0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 AC096631.2-201ENST00000436136 790 ntBASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 AC110285.6-201ENST00000617652 491 ntBASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 DUSP8P5-201ENST00000422884 1815 ntBASIC18.26■□□□□ 0.51
C11orf42Q8N5U0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 AL138724.1-201ENST00000606771 1088 ntBASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 pRNA.6-201ENST00000610482 90 ntBASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 pRNA.5-201ENST00000612139 90 ntBASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 pRNA.11-201ENST00000618423 90 ntBASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 pRNA.13-201ENST00000619112 90 ntBASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
C11orf42Q8N5U0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
C11orf42Q8N5U0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.24■□□□□ 0.51
C11orf42Q8N5U0 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.24■□□□□ 0.51
C11orf42Q8N5U0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.24■□□□□ 0.51
C11orf42Q8N5U0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C11orf42Q8N5U0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.24■□□□□ 0.51
C11orf42Q8N5U0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.24■□□□□ 0.51
C11orf42Q8N5U0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
C11orf42Q8N5U0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C11orf42Q8N5U0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C11orf42Q8N5U0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
C11orf42Q8N5U0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C11orf42Q8N5U0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.22■□□□□ 0.51
C11orf42Q8N5U0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms