Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.86■■□□□ 1.41
VPS52Q8N1B4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
VPS52Q8N1B4 AL137784.2-201ENST00000607332 1000 ntBASIC23.86■■□□□ 1.41
VPS52Q8N1B4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.86■■□□□ 1.41
VPS52Q8N1B4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.86■■□□□ 1.41
VPS52Q8N1B4 FP325331.1-202ENST00000623531 1380 ntBASIC23.86■■□□□ 1.41
VPS52Q8N1B4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VPS52Q8N1B4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
VPS52Q8N1B4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.86■■□□□ 1.41
VPS52Q8N1B4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.86■■□□□ 1.41
VPS52Q8N1B4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.85■■□□□ 1.41
VPS52Q8N1B4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
VPS52Q8N1B4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS52Q8N1B4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS52Q8N1B4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS52Q8N1B4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.85■■□□□ 1.41
VPS52Q8N1B4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS52Q8N1B4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
VPS52Q8N1B4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.85■■□□□ 1.41
VPS52Q8N1B4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS52Q8N1B4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
VPS52Q8N1B4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS52Q8N1B4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS52Q8N1B4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS52Q8N1B4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS52Q8N1B4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS52Q8N1B4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS52Q8N1B4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS52Q8N1B4 OR2I1P-207ENST00000453522 948 ntBASIC23.84■■□□□ 1.41
VPS52Q8N1B4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VPS52Q8N1B4 DUX4L4-201ENST00000566884 1269 ntBASIC23.84■■□□□ 1.41
VPS52Q8N1B4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS52Q8N1B4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS52Q8N1B4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VPS52Q8N1B4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
VPS52Q8N1B4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.83■■□□□ 1.41
VPS52Q8N1B4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
VPS52Q8N1B4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
VPS52Q8N1B4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
VPS52Q8N1B4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
VPS52Q8N1B4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.83■■□□□ 1.41
VPS52Q8N1B4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.83■■□□□ 1.41
VPS52Q8N1B4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
VPS52Q8N1B4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.83■■□□□ 1.4
VPS52Q8N1B4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
VPS52Q8N1B4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS52Q8N1B4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VPS52Q8N1B4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.82■■□□□ 1.4
VPS52Q8N1B4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.82■■□□□ 1.4
VPS52Q8N1B4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS52Q8N1B4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS52Q8N1B4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.82■■□□□ 1.4
VPS52Q8N1B4 CCDC92B-201ENST00000575506 885 ntBASIC23.82■■□□□ 1.4
VPS52Q8N1B4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.82■■□□□ 1.4
VPS52Q8N1B4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.82■■□□□ 1.4
VPS52Q8N1B4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
VPS52Q8N1B4 AC092437.1-201ENST00000624794 1048 ntBASIC23.82■■□□□ 1.4
VPS52Q8N1B4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VPS52Q8N1B4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS52Q8N1B4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.81■■□□□ 1.4
VPS52Q8N1B4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VPS52Q8N1B4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.81■■□□□ 1.4
VPS52Q8N1B4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VPS52Q8N1B4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VPS52Q8N1B4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS52Q8N1B4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
VPS52Q8N1B4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VPS52Q8N1B4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
VPS52Q8N1B4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
VPS52Q8N1B4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS52Q8N1B4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS52Q8N1B4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS52Q8N1B4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
VPS52Q8N1B4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.8■■□□□ 1.4
VPS52Q8N1B4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.8■■□□□ 1.4
VPS52Q8N1B4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.8■■□□□ 1.4
VPS52Q8N1B4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VPS52Q8N1B4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.8■■□□□ 1.4
VPS52Q8N1B4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS52Q8N1B4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VPS52Q8N1B4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS52Q8N1B4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS52Q8N1B4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS52Q8N1B4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VPS52Q8N1B4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.79■■□□□ 1.4
VPS52Q8N1B4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS52Q8N1B4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.79■■□□□ 1.4
VPS52Q8N1B4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.79■■□□□ 1.4
VPS52Q8N1B4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.79■■□□□ 1.4
VPS52Q8N1B4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VPS52Q8N1B4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.79■■□□□ 1.4
VPS52Q8N1B4 AC004812.2-201ENST00000611079 2094 ntBASIC23.79■■□□□ 1.4
VPS52Q8N1B4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS52Q8N1B4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS52Q8N1B4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
VPS52Q8N1B4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
VPS52Q8N1B4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
VPS52Q8N1B4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.78■■□□□ 1.4
VPS52Q8N1B4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VPS52Q8N1B4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms