Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
SMC5Q8IY18 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMC5Q8IY18 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMC5Q8IY18 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMC5Q8IY18 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
SMC5Q8IY18 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC27.44■■□□□ 1.98
SMC5Q8IY18 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
SMC5Q8IY18 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SMC5Q8IY18 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMC5Q8IY18 AL499627.2-201ENST00000606283 725 ntBASIC27.44■■□□□ 1.98
SMC5Q8IY18 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SMC5Q8IY18 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC27.44■■□□□ 1.98
SMC5Q8IY18 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SMC5Q8IY18 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC27.43■■□□□ 1.98
SMC5Q8IY18 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SMC5Q8IY18 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC27.43■■□□□ 1.98
SMC5Q8IY18 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC27.43■■□□□ 1.98
SMC5Q8IY18 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.43■■□□□ 1.98
SMC5Q8IY18 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC27.43■■□□□ 1.98
SMC5Q8IY18 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SMC5Q8IY18 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC27.43■■□□□ 1.98
SMC5Q8IY18 LINC01960-201ENST00000563759 1884 ntBASIC27.42■■□□□ 1.98
SMC5Q8IY18 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
SMC5Q8IY18 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SMC5Q8IY18 AC004687.1-201ENST00000579003 1625 ntBASIC27.42■■□□□ 1.98
SMC5Q8IY18 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
SMC5Q8IY18 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
SMC5Q8IY18 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC27.42■■□□□ 1.98
SMC5Q8IY18 GUSBP5-201ENST00000418136 578 ntBASIC27.42■■□□□ 1.98
SMC5Q8IY18 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
SMC5Q8IY18 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.42■■□□□ 1.98
SMC5Q8IY18 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC27.42■■□□□ 1.98
SMC5Q8IY18 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC27.41■■□□□ 1.98
SMC5Q8IY18 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMC5Q8IY18 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMC5Q8IY18 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
SMC5Q8IY18 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMC5Q8IY18 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SMC5Q8IY18 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMC5Q8IY18 AC092053.2-201ENST00000640557 1818 ntBASIC27.41■■□□□ 1.98
SMC5Q8IY18 GTSE1-AS1-202ENST00000623117 1518 ntBASIC27.41■■□□□ 1.98
SMC5Q8IY18 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMC5Q8IY18 MYB-221ENST00000527615 2381 ntTSL 5 BASIC27.41■■□□□ 1.98
SMC5Q8IY18 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SMC5Q8IY18 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMC5Q8IY18 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMC5Q8IY18 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMC5Q8IY18 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
SMC5Q8IY18 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
SMC5Q8IY18 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMC5Q8IY18 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMC5Q8IY18 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC27.4■■□□□ 1.98
SMC5Q8IY18 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
SMC5Q8IY18 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
SMC5Q8IY18 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC27.4■■□□□ 1.98
SMC5Q8IY18 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMC5Q8IY18 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMC5Q8IY18 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SMC5Q8IY18 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
SMC5Q8IY18 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.39■■□□□ 1.98
SMC5Q8IY18 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SMC5Q8IY18 AL117332.1-201ENST00000622628 974 ntBASIC27.39■■□□□ 1.98
SMC5Q8IY18 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.39■■□□□ 1.98
SMC5Q8IY18 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
SMC5Q8IY18 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
SMC5Q8IY18 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMC5Q8IY18 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC27.38■■□□□ 1.97
SMC5Q8IY18 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMC5Q8IY18 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SMC5Q8IY18 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMC5Q8IY18 AC137767.1-201ENST00000602918 1920 ntBASIC27.38■■□□□ 1.97
SMC5Q8IY18 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SMC5Q8IY18 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC27.38■■□□□ 1.97
SMC5Q8IY18 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMC5Q8IY18 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.38■■□□□ 1.97
SMC5Q8IY18 KRT16P3-201ENST00000439127 1283 ntBASIC27.38■■□□□ 1.97
SMC5Q8IY18 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.38■■□□□ 1.97
SMC5Q8IY18 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMC5Q8IY18 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMC5Q8IY18 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SMC5Q8IY18 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMC5Q8IY18 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMC5Q8IY18 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMC5Q8IY18 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMC5Q8IY18 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC27.38■■□□□ 1.97
SMC5Q8IY18 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMC5Q8IY18 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SMC5Q8IY18 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMC5Q8IY18 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC27.37■■□□□ 1.97
SMC5Q8IY18 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMC5Q8IY18 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
SMC5Q8IY18 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMC5Q8IY18 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMC5Q8IY18 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.37■■□□□ 1.97
SMC5Q8IY18 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC27.37■■□□□ 1.97
SMC5Q8IY18 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC27.37■■□□□ 1.97
SMC5Q8IY18 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMC5Q8IY18 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SMC5Q8IY18 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMC5Q8IY18 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms