Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.92■□□□□ 0.94
RAB43Q86YS6 SLC47A1P1-202ENST00000449666 945 ntBASIC20.92■□□□□ 0.94
RAB43Q86YS6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB43Q86YS6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.92■□□□□ 0.94
RAB43Q86YS6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RAB43Q86YS6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB43Q86YS6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB43Q86YS6 DUSP8P5-201ENST00000422884 1815 ntBASIC20.92■□□□□ 0.94
RAB43Q86YS6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB43Q86YS6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
RAB43Q86YS6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB43Q86YS6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB43Q86YS6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB43Q86YS6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB43Q86YS6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
RAB43Q86YS6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.91■□□□□ 0.94
RAB43Q86YS6 FP325331.1-202ENST00000623531 1380 ntBASIC20.91■□□□□ 0.94
RAB43Q86YS6 AC133637.1-201ENST00000624115 1537 ntBASIC20.91■□□□□ 0.94
RAB43Q86YS6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RAB43Q86YS6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RAB43Q86YS6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB43Q86YS6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB43Q86YS6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RAB43Q86YS6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RAB43Q86YS6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
RAB43Q86YS6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB43Q86YS6 TSPY26P-201ENST00000476365 1326 ntBASIC20.9■□□□□ 0.94
RAB43Q86YS6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB43Q86YS6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RAB43Q86YS6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.9■□□□□ 0.94
RAB43Q86YS6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB43Q86YS6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB43Q86YS6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RAB43Q86YS6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RAB43Q86YS6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RAB43Q86YS6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAB43Q86YS6 LINC01124-201ENST00000409786 2117 ntBASIC20.89■□□□□ 0.94
RAB43Q86YS6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB43Q86YS6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB43Q86YS6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB43Q86YS6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB43Q86YS6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB43Q86YS6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB43Q86YS6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB43Q86YS6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
RAB43Q86YS6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB43Q86YS6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RAB43Q86YS6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB43Q86YS6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB43Q86YS6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB43Q86YS6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB43Q86YS6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB43Q86YS6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB43Q86YS6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.88■□□□□ 0.93
RAB43Q86YS6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB43Q86YS6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.88■□□□□ 0.93
RAB43Q86YS6 AL499627.2-201ENST00000606283 725 ntBASIC20.88■□□□□ 0.93
RAB43Q86YS6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB43Q86YS6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB43Q86YS6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB43Q86YS6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RAB43Q86YS6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB43Q86YS6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB43Q86YS6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB43Q86YS6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB43Q86YS6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB43Q86YS6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB43Q86YS6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RAB43Q86YS6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.87■□□□□ 0.93
RAB43Q86YS6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB43Q86YS6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RAB43Q86YS6 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.87■□□□□ 0.93
RAB43Q86YS6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.87■□□□□ 0.93
RAB43Q86YS6 AL162430.1-201ENST00000480705 870 ntBASIC20.87■□□□□ 0.93
RAB43Q86YS6 IGHV3-19-201ENST00000521488 291 ntBASIC20.87■□□□□ 0.93
RAB43Q86YS6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.87■□□□□ 0.93
RAB43Q86YS6 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.87■□□□□ 0.93
RAB43Q86YS6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB43Q86YS6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB43Q86YS6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB43Q86YS6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB43Q86YS6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RAB43Q86YS6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAB43Q86YS6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB43Q86YS6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
RAB43Q86YS6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB43Q86YS6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB43Q86YS6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB43Q86YS6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.86■□□□□ 0.93
RAB43Q86YS6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB43Q86YS6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RAB43Q86YS6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB43Q86YS6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.86■□□□□ 0.93
RAB43Q86YS6 DUX4L4-201ENST00000566884 1269 ntBASIC20.86■□□□□ 0.93
RAB43Q86YS6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.86■□□□□ 0.93
RAB43Q86YS6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.86■□□□□ 0.93
RAB43Q86YS6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RAB43Q86YS6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB43Q86YS6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB43Q86YS6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms