Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.54■□□□□ 0.72
LRRC28Q86X40 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRC28Q86X40 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRC28Q86X40 AC139530.1-201ENST00000575312 1977 ntBASIC19.53■□□□□ 0.72
LRRC28Q86X40 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRRC28Q86X40 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC28Q86X40 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC28Q86X40 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC28Q86X40 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC28Q86X40 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC28Q86X40 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC28Q86X40 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC28Q86X40 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRC28Q86X40 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.53■□□□□ 0.72
LRRC28Q86X40 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRC28Q86X40 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC28Q86X40 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC28Q86X40 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC28Q86X40 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC28Q86X40 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC28Q86X40 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC28Q86X40 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC28Q86X40 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC28Q86X40 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC28Q86X40 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC28Q86X40 AF131216.4-201ENST00000638924 1588 ntBASIC19.52■□□□□ 0.71
LRRC28Q86X40 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC28Q86X40 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC28Q86X40 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
LRRC28Q86X40 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC28Q86X40 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC28Q86X40 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LRRC28Q86X40 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC28Q86X40 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC28Q86X40 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC28Q86X40 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC28Q86X40 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC28Q86X40 AC092028.1-203ENST00000608262 953 ntBASIC19.51■□□□□ 0.71
LRRC28Q86X40 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC28Q86X40 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC28Q86X40 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC28Q86X40 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC28Q86X40 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC28Q86X40 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC28Q86X40 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC28Q86X40 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LRRC28Q86X40 FBXW4P1-201ENST00000426721 2239 ntBASIC19.5■□□□□ 0.71
LRRC28Q86X40 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC28Q86X40 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC28Q86X40 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
LRRC28Q86X40 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC28Q86X40 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC28Q86X40 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC28Q86X40 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC28Q86X40 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LRRC28Q86X40 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC28Q86X40 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
LRRC28Q86X40 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC28Q86X40 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC28Q86X40 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC28Q86X40 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC28Q86X40 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC28Q86X40 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LRRC28Q86X40 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC28Q86X40 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC28Q86X40 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC28Q86X40 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC28Q86X40 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.48■□□□□ 0.71
LRRC28Q86X40 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.48■□□□□ 0.71
LRRC28Q86X40 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC28Q86X40 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC28Q86X40 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.48■□□□□ 0.71
LRRC28Q86X40 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
LRRC28Q86X40 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC28Q86X40 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC28Q86X40 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
LRRC28Q86X40 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC28Q86X40 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC28Q86X40 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC28Q86X40 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC28Q86X40 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC28Q86X40 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC28Q86X40 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC28Q86X40 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC28Q86X40 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC28Q86X40 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
LRRC28Q86X40 AL356441.2-201ENST00000443009 864 ntBASIC19.47■□□□□ 0.71
LRRC28Q86X40 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.47■□□□□ 0.71
LRRC28Q86X40 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms