Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC190Q86UF4 SMPD5-203ENST00000639008 1464 ntBASIC19.24■□□□□ 0.67
CCDC190Q86UF4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC190Q86UF4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC190Q86UF4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC190Q86UF4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC190Q86UF4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC190Q86UF4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC190Q86UF4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC190Q86UF4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC190Q86UF4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC190Q86UF4 AL391422.3-201ENST00000603791 2761 ntBASIC19.22■□□□□ 0.67
CCDC190Q86UF4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC190Q86UF4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC190Q86UF4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC190Q86UF4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC190Q86UF4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC190Q86UF4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC190Q86UF4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC190Q86UF4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC190Q86UF4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC190Q86UF4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC190Q86UF4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC190Q86UF4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC190Q86UF4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC190Q86UF4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC190Q86UF4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC190Q86UF4 AF106564.1-201ENST00000607058 2553 ntBASIC19.2■□□□□ 0.66
CCDC190Q86UF4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC190Q86UF4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC190Q86UF4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC190Q86UF4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC190Q86UF4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC190Q86UF4 FEM1AP4-201ENST00000443167 1987 ntBASIC19.2■□□□□ 0.66
CCDC190Q86UF4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC190Q86UF4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC190Q86UF4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC190Q86UF4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC190Q86UF4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC190Q86UF4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC190Q86UF4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC190Q86UF4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC190Q86UF4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC190Q86UF4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC190Q86UF4 DUX4L11-201ENST00000611504 1267 ntBASIC19.19■□□□□ 0.66
CCDC190Q86UF4 DUX4L12-201ENST00000614593 1267 ntBASIC19.19■□□□□ 0.66
CCDC190Q86UF4 DUX4L14-201ENST00000621227 1267 ntBASIC19.19■□□□□ 0.66
CCDC190Q86UF4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC190Q86UF4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC190Q86UF4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC190Q86UF4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC190Q86UF4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC190Q86UF4 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.18■□□□□ 0.66
CCDC190Q86UF4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC190Q86UF4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC190Q86UF4 LINC01006-201ENST00000333319 2292 ntBASIC19.18■□□□□ 0.66
CCDC190Q86UF4 Z98882.1-201ENST00000622160 2253 ntBASIC19.18■□□□□ 0.66
CCDC190Q86UF4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC190Q86UF4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC190Q86UF4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC190Q86UF4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC190Q86UF4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CCDC190Q86UF4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC190Q86UF4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC190Q86UF4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC190Q86UF4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC190Q86UF4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC190Q86UF4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC190Q86UF4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms