Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 AC105233.4-201ENST00000642045 216 ntBASIC15.56■□□□□ 0.08
CSMD3Q7Z407 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 DUSP8P4-201ENST00000399538 1761 ntBASIC15.56■□□□□ 0.08
CSMD3Q7Z407 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSMD3Q7Z407 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD3Q7Z407 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD3Q7Z407 KRT19P1-201ENST00000405746 1186 ntBASIC15.55■□□□□ 0.08
CSMD3Q7Z407 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD3Q7Z407 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC15.55■□□□□ 0.08
CSMD3Q7Z407 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD3Q7Z407 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD3Q7Z407 BX005040.4-201ENST00000637145 1518 ntBASIC15.55■□□□□ 0.08
CSMD3Q7Z407 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD3Q7Z407 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC15.55■□□□□ 0.08
CSMD3Q7Z407 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD3Q7Z407 ALDH1A3-203ENST00000557963 1670 ntBASIC15.55■□□□□ 0.08
CSMD3Q7Z407 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CSMD3Q7Z407 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD3Q7Z407 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CSMD3Q7Z407 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD3Q7Z407 KRT18P11-201ENST00000435214 1283 ntBASIC15.55■□□□□ 0.08
CSMD3Q7Z407 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD3Q7Z407 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSMD3Q7Z407 PRORSD1P-201ENST00000295112 541 ntBASIC15.54■□□□□ 0.08
CSMD3Q7Z407 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.54■□□□□ 0.08
CSMD3Q7Z407 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.54■□□□□ 0.08
CSMD3Q7Z407 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD3Q7Z407 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD3Q7Z407 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CSMD3Q7Z407 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD3Q7Z407 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC15.54■□□□□ 0.08
CSMD3Q7Z407 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.54■□□□□ 0.08
CSMD3Q7Z407 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.54■□□□□ 0.08
CSMD3Q7Z407 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD3Q7Z407 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.53■□□□□ 0.08
CSMD3Q7Z407 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC15.53■□□□□ 0.08
CSMD3Q7Z407 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD3Q7Z407 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.53■□□□□ 0.08
CSMD3Q7Z407 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD3Q7Z407 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD3Q7Z407 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD3Q7Z407 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CSMD3Q7Z407 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD3Q7Z407 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.53■□□□□ 0.08
CSMD3Q7Z407 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC15.53■□□□□ 0.08
CSMD3Q7Z407 RARA-203ENST00000394086 2008 ntTSL 2 BASIC15.53■□□□□ 0.08
CSMD3Q7Z407 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.53■□□□□ 0.08
CSMD3Q7Z407 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.53■□□□□ 0.08
CSMD3Q7Z407 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CSMD3Q7Z407 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD3Q7Z407 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD3Q7Z407 UBE2DNL-204ENST00000602536 740 ntBASIC15.52■□□□□ 0.08
CSMD3Q7Z407 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CSMD3Q7Z407 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD3Q7Z407 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CSMD3Q7Z407 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSMD3Q7Z407 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.52■□□□□ 0.07
CSMD3Q7Z407 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
CSMD3Q7Z407 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CSMD3Q7Z407 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.52■□□□□ 0.07
CSMD3Q7Z407 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.52■□□□□ 0.07
CSMD3Q7Z407 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSMD3Q7Z407 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CSMD3Q7Z407 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CSMD3Q7Z407 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CSMD3Q7Z407 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.52■□□□□ 0.07
CSMD3Q7Z407 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.52■□□□□ 0.07
CSMD3Q7Z407 AC022211.4-201ENST00000625094 2161 ntBASIC15.51■□□□□ 0.07
CSMD3Q7Z407 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 AC144652.1-201ENST00000609974 1624 ntBASIC15.51■□□□□ 0.07
CSMD3Q7Z407 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD3Q7Z407 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD3Q7Z407 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD3Q7Z407 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CSMD3Q7Z407 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD3Q7Z407 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD3Q7Z407 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSMD3Q7Z407 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms