Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 EPHX1-204ENST00000448202 895 ntTSL 218.7■□□□□ 0.582e-11■■■■□ 21.9
SND1Q7KZF4 TP53I13-210ENST00000582829 805 ntAPPRIS ALT2 TSL 518.39■□□□□ 0.534e-8■■■■□ 21.9
SND1Q7KZF4 WDR74-213ENST00000542347 988 ntTSL 218.12■□□□□ 0.499e-6■■■■□ 21.9
SND1Q7KZF4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.449e-6■■■■□ 21.9
SND1Q7KZF4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.76■□□□□ 0.439e-6■■■■□ 21.9
SND1Q7KZF4 TP53I13-205ENST00000578749 1050 ntAPPRIS ALT2 TSL 317.67■□□□□ 0.424e-8■■■■□ 21.9
SND1Q7KZF4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.61■□□□□ 0.419e-6■■■■□ 21.9
SND1Q7KZF4 WDR74-211ENST00000540620 984 ntTSL 317.38■□□□□ 0.379e-6■■■■□ 21.9
SND1Q7KZF4 CIAO1-204ENST00000491394 748 ntTSL 217.37■□□□□ 0.379e-6■■■■□ 21.9
SND1Q7KZF4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.339e-6■■■■□ 21.9
SND1Q7KZF4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.269e-6■■■■□ 21.9
SND1Q7KZF4 AAAS-216ENST00000550033 900 ntTSL 316.66■□□□□ 0.269e-6■■■■□ 21.9
SND1Q7KZF4 OXA1L-204ENST00000431881 889 ntTSL 316.65■□□□□ 0.269e-6■■■■□ 21.9
SND1Q7KZF4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.249e-6■■■■□ 21.9
SND1Q7KZF4 TP53I13-203ENST00000577934 664 ntTSL 316.53■□□□□ 0.244e-8■■■■□ 21.9
SND1Q7KZF4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.232e-51■■■■□ 21.9
SND1Q7KZF4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.34■□□□□ 0.219e-6■■■■□ 21.9
SND1Q7KZF4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.26■□□□□ 0.199e-6■■■■□ 21.9
SND1Q7KZF4 AAAS-220ENST00000552876 2016 ntTSL 216.25■□□□□ 0.199e-6■■■■□ 21.9
SND1Q7KZF4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.21■□□□□ 0.199e-6■■■■□ 21.9
SND1Q7KZF4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.08■□□□□ 0.169e-6■■■■□ 21.9
SND1Q7KZF4 ST7L-209ENST00000459630 765 ntTSL 516.06■□□□□ 0.169e-6■■■■□ 21.9
SND1Q7KZF4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.139e-6■■■■□ 21.9
SND1Q7KZF4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.68■□□□□ 0.19e-6■■■■□ 21.9
SND1Q7KZF4 AAAS-205ENST00000546572 582 ntTSL 215.53■□□□□ 0.089e-6■■■■□ 21.9
SND1Q7KZF4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.48■□□□□ 0.079e-6■■■■□ 21.9
SND1Q7KZF4 PLOD3-205ENST00000440925 536 ntTSL 415.39■□□□□ 0.052e-7■■■■□ 21.9
SND1Q7KZF4 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.39■□□□□ 0.059e-6■■■■□ 21.9
SND1Q7KZF4 OXA1L-205ENST00000442110 691 ntTSL 515.29■□□□□ 0.049e-6■■■■□ 21.9
SND1Q7KZF4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.19■□□□□ 0.029e-6■■■■□ 21.9
SND1Q7KZF4 ST7L-204ENST00000361846 4348 ntTSL 1 (best)15.08■□□□□ 0.019e-6■■■■□ 21.9
SND1Q7KZF4 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.03■□□□□ -09e-6■■■■□ 21.9
SND1Q7KZF4 ST7L-222ENST00000490715 4483 ntTSL 1 (best)15.03■□□□□ -09e-6■■■■□ 21.9
SND1Q7KZF4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.029e-6■■■■□ 21.9
SND1Q7KZF4 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.67□□□□□ -0.069e-6■■■■□ 21.9
SND1Q7KZF4 AP2B1-209ENST00000592167 461 ntTSL 414.5□□□□□ -0.097e-11■■■■□ 21.9
SND1Q7KZF4 EIF2B1-203ENST00000534960 618 ntTSL 514.46□□□□□ -0.099e-6■■■■□ 21.9
SND1Q7KZF4 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.119e-6■■■■□ 21.9
SND1Q7KZF4 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.119e-6■■■■□ 21.9
SND1Q7KZF4 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC14.31□□□□□ -0.129e-6■■■■□ 21.9
SND1Q7KZF4 OXA1L-208ENST00000483939 1224 ntTSL 213.83□□□□□ -0.29e-6■■■■□ 21.9
SND1Q7KZF4 UBE2A-210ENST00000630695 1771 ntTSL 4 BASIC13.82□□□□□ -0.29e-6■■■■□ 21.9
SND1Q7KZF4 PRKAG1-205ENST00000547306 1531 ntTSL 5 BASIC13.82□□□□□ -0.29e-6■■■■□ 21.9
SND1Q7KZF4 LAMB1-212ENST00000479448 304 ntTSL 313.64□□□□□ -0.236e-11■■■■□ 21.9
SND1Q7KZF4 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC13.53□□□□□ -0.249e-6■■■■□ 21.9
SND1Q7KZF4 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.271e-7■■■■□ 21.9
SND1Q7KZF4 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.282e-8■■■■□ 21.9
SND1Q7KZF4 ADGRE5-216ENST00000593028 483 ntTSL 313.27□□□□□ -0.299e-6■■■■□ 21.9
SND1Q7KZF4 ALG10-203ENST00000541178 1977 ntTSL 513.04□□□□□ -0.329e-6■■■■□ 21.9
SND1Q7KZF4 CIAO1-201ENST00000272402 3588 ntTSL 213.04□□□□□ -0.329e-6■■■■□ 21.9
SND1Q7KZF4 ALG10-204ENST00000541875 1637 ntTSL 1 (best)12.93□□□□□ -0.349e-6■■■■□ 21.9
SND1Q7KZF4 OXA1L-213ENST00000612549 2971 ntTSL 1 (best) BASIC12.93□□□□□ -0.349e-6■■■■□ 21.9
SND1Q7KZF4 OXA1L-209ENST00000495424 1679 ntTSL 212.83□□□□□ -0.369e-6■■■■□ 21.9
SND1Q7KZF4 ALG10-202ENST00000538927 571 ntTSL 5 BASIC12.73□□□□□ -0.379e-6■■■■□ 21.9
SND1Q7KZF4 AAAS-212ENST00000548931 1075 ntTSL 512.67□□□□□ -0.389e-6■■■■□ 21.9
SND1Q7KZF4 PRKAG1-202ENST00000546531 1679 ntTSL 512.63□□□□□ -0.399e-6■■■■□ 21.9
SND1Q7KZF4 PGAM1-202ENST00000467867 1187 ntTSL 212.61□□□□□ -0.399e-6■■■■□ 21.9
SND1Q7KZF4 UBE2A-211ENST00000631185 1435 ntTSL 5 BASIC12.61□□□□□ -0.399e-6■■■■□ 21.9
SND1Q7KZF4 PLOD3-211ENST00000466881 661 ntTSL 212.58□□□□□ -0.46e-7■■■■□ 21.9
SND1Q7KZF4 CANT1-207ENST00000588611 900 ntTSL 312.3□□□□□ -0.449e-6■■■■□ 21.9
SND1Q7KZF4 SELENOK-204ENST00000495461 1633 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.442e-8■■■■□ 21.9
SND1Q7KZF4 LTA4H-207ENST00000548852 1810 ntTSL 212.23□□□□□ -0.459e-6■■■■□ 21.9
SND1Q7KZF4 ST7L-223ENST00000492274 582 ntTSL 312.16□□□□□ -0.469e-6■■■■□ 21.9
SND1Q7KZF4 ADGRE5-204ENST00000586517 578 ntTSL 411.96□□□□□ -0.499e-6■■■■□ 21.9
SND1Q7KZF4 OXA1L-206ENST00000473744 824 ntTSL 311.91□□□□□ -0.59e-6■■■■□ 21.9
SND1Q7KZF4 AP2B1-205ENST00000590432 554 ntTSL 411.9□□□□□ -0.57e-11■■■■□ 21.9
SND1Q7KZF4 PRF1-204ENST00000639390 523 ntTSL 511.66□□□□□ -0.549e-6■■■■□ 21.9
SND1Q7KZF4 LTA4H-201ENST00000228740 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.559e-6■■■■□ 21.9
SND1Q7KZF4 CTNNB1-206ENST00000431914 634 ntTSL 411.59□□□□□ -0.559e-6■■■■□ 21.9
SND1Q7KZF4 AAAS-207ENST00000547520 769 ntTSL 311.47□□□□□ -0.579e-6■■■■□ 21.9
SND1Q7KZF4 ST7L-210ENST00000463235 2574 ntTSL 1 (best)11.28□□□□□ -0.69e-6■■■■□ 21.9
SND1Q7KZF4 ST7L-203ENST00000360743 4206 ntTSL 1 (best) BASIC11.27□□□□□ -0.619e-6■■■■□ 21.9
SND1Q7KZF4 UBE2A-201ENST00000346330 718 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.619e-6■■■■□ 21.9
SND1Q7KZF4 OXA1L-210ENST00000556473 593 ntTSL 411.13□□□□□ -0.639e-6■■■■□ 21.9
SND1Q7KZF4 ST7L-220ENST00000485753 1023 ntTSL 211.05□□□□□ -0.649e-6■■■■□ 21.9
SND1Q7KZF4 UBE2A-209ENST00000629303 557 ntTSL 411.03□□□□□ -0.649e-6■■■■□ 21.9
SND1Q7KZF4 SELENOK-203ENST00000488746 611 ntTSL 310.91□□□□□ -0.662e-8■■■■□ 21.9
SND1Q7KZF4 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.689e-6■■■■□ 21.9
SND1Q7KZF4 ADGRE5-209ENST00000587728 587 ntTSL 410.45□□□□□ -0.749e-6■■■■□ 21.9
SND1Q7KZF4 CSTF1-204ENST00000452950 1233 ntTSL 310.38□□□□□ -0.759e-6■■■■□ 21.9
SND1Q7KZF4 HSPA8P8-201ENST00000419827 1942 ntBASIC10.37□□□□□ -0.759e-6■■■■□ 21.9
SND1Q7KZF4 PRKAG1-216ENST00000551770 1015 ntTSL 310.34□□□□□ -0.759e-6■■■■□ 21.9
SND1Q7KZF4 WDR74-209ENST00000538150 487 ntTSL 310.21□□□□□ -0.779e-6■■■■□ 21.9
SND1Q7KZF4 ST7L-208ENST00000418497 860 ntTSL 510.12□□□□□ -0.799e-6■■■■□ 21.9
SND1Q7KZF4 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC9.98□□□□□ -0.814e-8■■■■□ 21.9
SND1Q7KZF4 NUP155-208ENST00000515054 824 ntTSL 29.95□□□□□ -0.829e-6■■■■□ 21.9
SND1Q7KZF4 LAMB1-210ENST00000474380 945 ntTSL 59.93□□□□□ -0.821e-7■■■■□ 21.9
SND1Q7KZF4 CSTF1-206ENST00000493039 2234 ntTSL 59.68□□□□□ -0.869e-6■■■■□ 21.9
SND1Q7KZF4 PRDX3-203ENST00000494433 2277 ntTSL 1 (best)9.61□□□□□ -0.879e-6■■■■□ 21.9
SND1Q7KZF4 CTNNB1-208ENST00000441708 608 ntTSL 49.56□□□□□ -0.889e-6■■■■□ 21.9
SND1Q7KZF4 OXA1L-207ENST00000481218 1596 ntTSL 59.51□□□□□ -0.899e-6■■■■□ 21.9
SND1Q7KZF4 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.929e-6■■■■□ 21.9
SND1Q7KZF4 PRKAG1-213ENST00000550448 1174 ntTSL 29.24□□□□□ -0.939e-6■■■■□ 21.9
SND1Q7KZF4 ADGRE5-213ENST00000591737 541 ntTSL 49.09□□□□□ -0.959e-6■■■■□ 21.9
SND1Q7KZF4 AP2B1-206ENST00000590538 568 ntTSL 48.75□□□□□ -1.017e-11■■■■□ 21.9
SND1Q7KZF4 AP2B1-208ENST00000591610 559 ntTSL 48.66□□□□□ -1.027e-11■■■■□ 21.9
SND1Q7KZF4 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.54□□□□□ -1.049e-6■■■■□ 21.9
SND1Q7KZF4 PRKAG1-212ENST00000550125 725 ntTSL 58.52□□□□□ -1.059e-6■■■■□ 21.9
SND1Q7KZF4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC8.46□□□□□ -1.059e-6■■■■□ 21.9
SND1Q7KZF4 MFAP3-212ENST00000522782 643 ntTSL 1 (best)8.4□□□□□ -1.069e-6■■■■□ 21.9
Retrieved 100 of 13,567 protein–RNA pairs in 89.9 ms